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CN-SCN_Erythrobacter_14x

CN-SCN_Sphingomonadales_62_14
In projects: CN-SCN  |  SCN_92

Consensus taxonomy: Sphingomonadales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 13.72 Longest contig: 128.95 Kbp Bin length: 2.80 Mbp GC content: 61.96 %
Contigs count: 136 Features count: 2751 rRNAs count: 0 tRNAs count: 36

Genome completeness

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1

Description

Partial 38

Displaying items 1-50 of 136 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_12836 ERY14_103
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (75%)
4 5003 bp 63.50 11.55 87.49
cn_combo_scaffold_14366 ERY14_134
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
4 5140 bp 62.35 13.09 93.44
cn_combo_scaffold_12273 ERY14_101
Species: BJP_IG2102_Porphyrobacter_62_18 (81.82%)
11 5210 bp 61.21 14.11 89.83
cn_combo_scaffold_12227 ERY14_100
Order: Sphingomonadales (100%)
5 5223 bp 63.93 12.46 89.37
cn_combo_scaffold_12163 ERY14_133
Order: Sphingomonadales (83.33%)
6 5248 bp 60.99 12.48 86.66
cn_combo_scaffold_12001 ERY14_99
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (60%)
5 5313 bp 65.20 13.80 97.06
cn_combo_scaffold_11910 ERY14_108
Class: Alphaproteobacteria (50%)
4 5352 bp 59.21 13.73 88.12
cn_combo_scaffold_15593 ERY14_135
Order: Sphingomonadales (60%)
5 5486 bp 61.96 13.49 82.79
cn_combo_scaffold_16442 ERY14_104
Genus: Erythrobacter (50%)
6 5524 bp 62.55 17.27 92.38
cn_combo_scaffold_11244 ERY14_98
Order: Sphingomonadales (100%)
6 5653 bp 61.77 13.11 89.53
cn_combo_scaffold_11211 ERY14_97
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
8 5669 bp 59.18 13.23 94.36
cn_combo_scaffold_10954 ERY14_96
Species: BJP_IG2102_Porphyrobacter_62_18 (60%)
5 5791 bp 63.17 13.14 95.32
cn_combo_scaffold_18726 ERY14_105
Species: BJP_IG2102_Porphyrobacter_62_18 (75%)
4 5920 bp 66.20 14.19 86.60
cn_combo_scaffold_10528 ERY14_95
Order: Sphingomonadales (85.71%)
7 6020 bp 63.29 12.87 97.33
cn_combo_scaffold_10060 ERY14_116
Species: Erythrobacter litoralis (62.5%)
8 6289 bp 62.47 13.32 93.69
cn_combo_scaffold_9890 ERY14_132
Order: Sphingomonadales (100%)
5 6385 bp 60.58 13.61 59.34
cn_combo_scaffold_9843 ERY14_94
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
6 6411 bp 61.46 13.38 97.19
cn_combo_scaffold_9827 ERY14_93
Species: BJP_IG2102_Porphyrobacter_62_18 (66.67%)
9 6428 bp 60.73 14.05 97.87
cn_combo_scaffold_9409 ERY14_115
Class: Alphaproteobacteria (83.33%)
6 6674 bp 62.35 12.87 97.86
cn_combo_scaffold_9047 ERY14_106
Order: Sphingomonadales (100%)
5 6955 bp 61.09 10.40 94.03
cn_combo_scaffold_8940 ERY14_92
Species: BJP_IG2102_Porphyrobacter_62_18 (57.14%)
7 7041 bp 61.98 14.61 95.65
cn_combo_scaffold_8793 ERY14_117
Phylum: Proteobacteria (57.14%)
7 7151 bp 59.70 9.91 77.15
cn_combo_scaffold_8562 ERY14_90
Order: Sphingomonadales (100%)
7 7306 bp 62.40 13.81 93.99
cn_combo_scaffold_8386 ERY14_89
Species: Erythrobacter sp. NAP1 (50%)
4 7443 bp 62.89 14.12 91.98
cn_combo_scaffold_8258 ERY14_88
Order: Sphingomonadales (81.82%)
11 7552 bp 60.51 13.45 81.16
cn_combo_scaffold_8081 ERY14_87
Order: Sphingomonadales (100%)
7 7692 bp 62.04 13.81 93.95
cn_combo_scaffold_8045 ERY14_86
Order: Sphingomonadales (100%)
8 7735 bp 62.61 13.69 91.42
cn_combo_scaffold_8034 ERY14_131
Genus: Novosphingobium (50%)
8 7740 bp 60.87 13.73 90.16
cn_combo_scaffold_7646 ERY14_130
Order: Sphingomonadales (90%)
10 8065 bp 64.95 13.19 95.93
cn_combo_scaffold_7281 ERY14_85
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
12 8417 bp 62.60 13.71 92.49
cn_combo_scaffold_7209 ERY14_84
Order: Sphingomonadales (100%)
9 8495 bp 64.94 14.13 90.94
cn_combo_scaffold_7015 ERY14_82
Order: Sphingomonadales (100%)
3 8721 bp 63.08 13.76 97.01
cn_combo_scaffold_8629 ERY14_91
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
10 8834 bp 63.50 14.39 91.73
cn_combo_scaffold_6635 ERY14_81
Species: BJP_08E140C01_10KDA_Sphingomonadales_62_47 (62.5%)
8 9148 bp 61.82 12.00 90.31
cn_combo_scaffold_6578 ERY14_80
Species: BJP_IG2102_Porphyrobacter_62_18 (50%)
14 9222 bp 62.80 13.47 93.07
cn_combo_scaffold_6471 ERY14_113
Order: Sphingomonadales (54.55%)
11 9348 bp 61.92 14.09 82.61
cn_combo_scaffold_6224 ERY14_79
Order: Sphingomonadales (100%)
14 9682 bp 62.63 13.63 90.42
cn_combo_scaffold_5791 ERY14_110
Species: uncultured bacterium pAKD4 (72.73%)
11 10329 bp 61.51 12.24 80.80
cn_combo_scaffold_5707 ERY14_77
Species: BJP_IG2102_Porphyrobacter_62_18 (83.33%)
12 10454 bp 64.72 15.46 89.42
cn_combo_scaffold_5447 ERY14_74
Order: Sphingomonadales (100%)
11 10904 bp 62.86 14.03 97.64
cn_combo_scaffold_5394 ERY14_129
Order: Sphingomonadales (71.43%)
14 10997 bp 58.29 13.80 82.56
cn_combo_scaffold_5247 ERY14_73
Genus: Erythrobacter (69.23%)
13 11251 bp 62.43 14.04 94.42
cn_combo_scaffold_5074 ERY14_112
Class: Alphaproteobacteria (60%)
10 11612 bp 63.15 13.48 90.84
cn_combo_scaffold_5020 ERY14_128
Order: Sphingomonadales (87.5%)
8 11726 bp 63.37 14.54 96.27
cn_combo_scaffold_5009 ERY14_72
Order: Sphingomonadales (88.89%)
9 11741 bp 60.55 13.34 93.81
cn_combo_scaffold_4969 ERY14_71
Order: Sphingomonadales (84.62%)
13 11821 bp 61.38 13.90 87.76
cn_combo_scaffold_4945 ERY14_70
Order: Sphingomonadales (58.33%)
12 11874 bp 61.65 13.79 85.36
cn_combo_scaffold_4917 ERY14_69
Order: Sphingomonadales (91.67%)
12 11948 bp 61.17 12.76 88.11
cn_combo_scaffold_12539 ERY14_102
Order: Sphingomonadales (100%)
14 11974 bp 63.32 13.55 95.08
cn_combo_scaffold_4909 ERY14_68
Order: Sphingomonadales (92.31%)
13 11977 bp 62.54 13.89 89.21
Displaying items 1-50 of 136 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.