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CN-SCN_Gemmatimonadetes_22x

CN-SCN_Gemmatimonadetes_70_23
In projects: CN-SCN  |  SCN_92  |  gemmatimonadetes_ggkbase

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 22.61 Longest contig: 358.95 Kbp Bin length: 4.70 Mbp GC content: 70.18 %
Contigs count: 84 Features count: 4032 rRNAs count: 1 tRNAs count: 47

Genome completeness

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38

Description

Full 52

Displaying items 1-50 of 84 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_9615 GEM22_77
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
6 6542 bp 71.54 21.11 99.51
cn_combo_scaffold_5476 GEM22_62
Species: Gemmatimonadetes bacterium KBS708 (81.82%)
11 10853 bp 70.87 18.93 98.02
cn_combo_scaffold_2018 GEM22_42
Domain: Bacteria (58.14%)
43 31725 bp 71.65 19.34 97.71
cn_combo_scaffold_803 GEM22_80
Domain: Bacteria (88.89%)
45 60090 bp 70.09 21.35 96.70
cn_combo_scaffold_10593 GEM22_83 6 5981 bp 71.48 15.60 96.25
cn_combo_scaffold_1887 GEM22_40
Species: Gemmatimonadetes bacterium KBS708 (59.26%)
27 28733 bp 71.11 22.44 96.11
cn_combo_scaffold_3792 GEM22_58
Species: Gemmatimonadetes bacterium KBS708 (50%)
16 17960 bp 73.05 19.88 95.78
cn_combo_scaffold_8576 GEM22_82 9 7299 bp 69.90 16.18 95.73
cn_combo_scaffold_892 GEM22_22
Species: Gemmatimonadetes bacterium KBS708 (60%)
100 101991 bp 71.75 20.62 95.63
cn_combo_scaffold_153 GEM22_3
Species: Gemmatimonadetes bacterium KBS708 (56.98%)
265 271198 bp 70.29 21.35 95.33
cn_combo_scaffold_1217 GEM22_30
Species: Gemmatimonadetes bacterium KBS708 (57.89%)
38 47250 bp 71.49 17.97 95.31
cn_combo_scaffold_1050 GEM22_25
Class: Gemmatimonadetes (70.83%)
48 46212 bp 69.09 20.92 95.15
cn_combo_scaffold_2279 GEM22_46
Species: Gemmatimonadetes bacterium KBS708 (56%)
25 23927 bp 70.88 20.84 95.11
cn_combo_scaffold_5165 GEM22_60
Species: Gemmatimonadetes bacterium KBS708 (63.64%)
11 11418 bp 75.05 20.02 95.03
cn_combo_scaffold_915 GEM22_21
Class: Gemmatimonadetes (54.55%)
44 52245 bp 71.06 20.38 94.90
cn_combo_scaffold_5670 GEM22_64
Domain: Bacteria (93.75%)
16 24586 bp 71.39 23.83 94.66
cn_combo_scaffold_1506 GEM22_36
Species: Gemmatimonadetes bacterium KBS708 (72.22%)
36 37788 bp 69.24 20.96 94.61
cn_combo_scaffold_2047 GEM22_43
Species: Gemmatimonadetes bacterium KBS708 (50%)
20 26765 bp 69.09 20.69 94.50
cn_combo_scaffold_2025 GEM22_41
Species: Gemmatimonadetes bacterium KBS708 (57.89%)
19 29225 bp 70.26 22.36 94.27
cn_combo_scaffold_496 GEM22_11
Class: Gemmatimonadetes (62.96%)
108 123113 bp 70.63 20.68 94.10
cn_combo_scaffold_3108 GEM22_54
Class: Gemmatimonadetes (50%)
22 28594 bp 71.53 20.99 93.77
cn_combo_scaffold_3117 GEM22_53
Species: Gemmatimonadetes bacterium KBS708 (76.47%)
17 18276 bp 71.86 21.69 93.71
cn_combo_scaffold_4314 GEM22_84
Domain: Bacteria (68.75%)
16 13553 bp 67.87 23.22 93.65
cn_combo_scaffold_2595 GEM22_50
Species: Gemmatimonadetes bacterium KBS708 (68.42%)
19 21464 bp 70.97 19.81 93.49
cn_combo_scaffold_3596 GEM22_56
Class: Gemmatimonadetes (53.85%)
13 15999 bp 71.99 23.24 93.47
cn_combo_scaffold_681 GEM22_17
Class: Gemmatimonadetes (64.29%)
56 80664 bp 71.15 19.41 93.26
cn_combo_scaffold_996 GEM22_24
Species: Gemmatimonadetes bacterium KBS708 (51.35%)
74 85826 bp 70.83 22.84 93.25
cn_combo_scaffold_5640 GEM22_63
Domain: Bacteria (63.64%)
11 10571 bp 68.55 17.01 93.08
cn_combo_scaffold_692 GEM22_18
Class: Gemmatimonadetes (56.47%)
85 115215 bp 70.41 21.75 93.08
cn_combo_scaffold_1164 GEM22_27
Class: Gemmatimonadetes (66.67%)
39 42339 bp 70.83 21.92 92.86
cn_combo_scaffold_2386 GEM22_48
Class: Gemmatimonadetes (71.43%)
21 23036 bp 70.07 21.38 92.76
cn_combo_scaffold_1533 GEM22_37
Class: Gemmatimonadetes (57.58%)
33 33581 bp 71.38 24.51 92.75
cn_combo_scaffold_1139 GEM22_28
Domain: Bacteria (87.5%)
56 80125 bp 70.91 21.56 92.74
cn_combo_scaffold_530 GEM22_14
Class: Gemmatimonadetes (61.84%)
152 165556 bp 70.64 21.75 92.50
cn_combo_scaffold_369 GEM22_8
Domain: Bacteria (90.86%)
186 231214 bp 70.74 22.50 92.37
cn_combo_scaffold_652 GEM22_15
Phylum: Gemmatimonadetes (53.06%)
49 64342 bp 70.70 23.20 92.23
cn_combo_scaffold_7530 GEM22_67
Class: Gemmatimonadetes (53.85%)
13 12168 bp 70.79 18.47 92.05
cn_combo_scaffold_2076 GEM22_44
Species: Gemmatimonadetes bacterium KBS708 (53.13%)
32 38247 bp 71.12 21.31 91.88
cn_combo_scaffold_9151 GEM22_72
Class: Gemmatimonadetes (62.5%)
8 6875 bp 70.18 21.57 91.64
cn_combo_scaffold_1606 GEM22_38
Domain: Bacteria (72.73%)
22 32484 bp 69.79 21.13 91.63
cn_combo_scaffold_395 GEM22_7
Phylum: Gemmatimonadetes (52.86%)
70 90259 bp 70.86 23.56 91.59
cn_combo_scaffold_787 GEM22_20
Class: Gemmatimonadetes (57.14%)
70 87531 bp 70.14 22.48 91.50
cn_combo_scaffold_9464 GEM22_74
Species: Gemmatimonadetes bacterium KBS708 (83.33%)
6 6643 bp 70.90 20.22 91.45
cn_combo_scaffold_1256 GEM22_33
Species: Gemmatimonadetes bacterium KBS708 (50.98%)
51 56582 bp 71.56 21.71 91.43
cn_combo_scaffold_1226 GEM22_31
Phylum: Gemmatimonadetes (57.14%)
35 40732 bp 70.42 22.61 91.39
cn_combo_scaffold_314 GEM22_6
Phylum: Gemmatimonadetes (54.17%)
96 102158 bp 70.59 22.93 91.38
cn_combo_scaffold_97 GEM22_2
Class: Gemmatimonadetes (51.4%)
286 358948 bp 68.39 26.04 91.18
cn_combo_scaffold_4096 GEM22_59
Domain: Bacteria (94.12%)
17 14302 bp 69.58 20.05 91.12
cn_combo_scaffold_2253 GEM22_45
Species: Gemmatimonadetes bacterium KBS708 (50%)
26 24290 bp 70.55 17.76 91.04
cn_combo_scaffold_463 GEM22_10
Domain: Bacteria (76.67%)
60 82917 bp 68.33 24.04 90.79
Displaying items 1-50 of 84 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.