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gwf2_scaffold_33

Alias: PER_GWF2_39_17_1

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Displaying items 31-60 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_33_31
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

41356..41943
DNA (588bp) protein (196aa)
Putative DedA family, membrane protein n=1 Tax=Pelagibaca bermudensis HTCC2601 RepID=Q0FPG2_9RHOB
DedA family protein Tax=PER_GWF2_39_17
DedA family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=36)
gwf2_scaffold_33_32
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

41978..43174
DNA (1197bp) protein (399aa)
Glycosyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X7N1_9PSEU
glucosyltransferase Tax=PER_GWF2_39_17
glucosyltransferase
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF38 from=2 to=384 evalue=2.5e-56)
gwf2_scaffold_33_33
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

43280..43711
DNA (432bp) protein (144aa)
UPI000288B65D related cluster n=1 Tax=unknown RepID=UPI000288B65D
transposase IS200-family protein Tax=PER_GWF2_39_17
transposase IS200-family protein
seg (db=Seg db_id=seg from=89 to=99)
gwf2_scaffold_33_34
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

43944..44144
DNA (201bp) protein (67aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_35
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(44158..46413)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF10412 from=321 to=623 evalue=1.7e-07 interpro_id=IPR019476 interpro_description=Type IV secretion system, TraD, DNA-binding domain)
gwf2_scaffold_33_36
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(46538..46984)
DNA (447bp) protein (149aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Z8_9CLOT
Transcriptional regulator NrdR, transcriptional repressor NrdR {ECO:0000313|EMBL:KKR09198.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_1
nrdR; transcriptional regulator NrdR
(db=HMMPfam db_id=PF03477 from=50 to=135 evalue=1.1e-16 interpro_id=IPR005144 interpro_description=ATP-cone)
gwf2_scaffold_33_37
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(47114..47902)
DNA (789bp) protein (263aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
gwf2_scaffold_33_38
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(47935..49167)
DNA (1233bp) protein (411aa)
S-layer homology domain Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
seg (db=Seg db_id=seg from=10 to=27)
SLH (db=ProfileScan db_id=PS51272 from=359 to=410 evalue=9.242 interpro_id=IPR001119 interpro_description=S-layer homology domain)
gwf2_scaffold_33_39
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(49209..50723)
DNA (1515bp) protein (505aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=67 to=71)
gwf2_scaffold_33_40
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

50860..52041
DNA (1182bp) protein (394aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=249 to=263)
gwf2_scaffold_33_41
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(52090..53232)
DNA (1143bp) protein (381aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein, dGTPase {ECO:0000313|EMBL:KKR23644.1}; EC=3.1.5.1 {ECO:0000313|EMBL:KKR23644.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" sou
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WTT7_GEOS8 rbh
deoxyguanosinetriphosphate triphosphohydrolase
(db=HMMPfam db_id=PF01966 from=76 to=198 evalue=1.5e-17 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
gwf2_scaffold_33_42
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

53293..55032
DNA (1740bp) protein (580aa)
asparaginase (EC:3.5.1.1) Tax=PER_GWF2_39_17
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
hypothetical protein
gb def: S-layer protein, putative (db=HMMPanther db_id=PTHR22909:SF12 from=466 to=512 evalue=0.00071)
gwf2_scaffold_33_43
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

55069..55980
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S371_THEOJ
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=PER_GWF2_39_17
Tyrosine recombinase XerD
seg (db=Seg db_id=seg from=109 to=124)
gwf2_scaffold_33_44
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

56041..56766
DNA (726bp) protein (242aa)
Cell division ATP-binding protein FtsE n=1 Tax=Dialister microaerophilus UPII 345-E RepID=E4L8Q5_9FIRM
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=PER_GWF2_39_17
ftsE; cell division ATP-binding protein FtsE
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=137 to=151 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwf2_scaffold_33_45
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(56772..57053)
DNA (282bp) protein (94aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_46
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

57209..58333
DNA (1125bp) protein (375aa)
phosphoribosylformylglycinamidine cyclo-ligase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=PER_GWF2_39_17
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQD2_9BACT
phosphoribosylformylglycinamidine cyclo-ligase
purM: phosphoribosylformylglycinamidine cycl (db=HMMTigr db_id=TIGR00878 from=17 to=355 evalue=1.1e-62 interpro_id=IPR004733 interpro_description=Phosphoribosylformylglycinamidine cyclo-ligase GO=Molecular Function: phosphoribosylformylglycinamidine cyclo-ligase activity (GO:0004641), Cellular Component: cytoplasm (GO:0005737), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
gwf2_scaffold_33_47
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

58398..59294
DNA (897bp) protein (299aa)
DNA protecting protein DprA n=1 Tax=Pasteurella bettyae CCUG 2042 RepID=I3D9V2_9PAST
smf; Smf protein; K04096 DNA processing protein Tax=PER_GWF2_39_17
smf; Smf protein
seg (db=Seg db_id=seg from=146 to=157)
gwf2_scaffold_33_48
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

59400..59726
DNA (327bp) protein (109aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=42 to=63 evalue=NA)
gwf2_scaffold_33_49
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

59743..61941
DNA (2199bp) protein (733aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=94 to=115 evalue=NA)
seg (db=Seg db_id=seg from=95 to=110)
gwf2_scaffold_33_50
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

62140..62766
DNA (627bp) protein (209aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_51
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

62786..63967
DNA (1182bp) protein (394aa)
MAJOR FACILITATOR SUPERFAMILY MEMBER Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
seg (db=Seg db_id=seg from=100 to=114)
MFS general substrate transporter (db=superfamily db_id=SSF103473 from=14 to=190 evalue=1.8e-15 interpro_id=IPR016196 interpro_description=Major facilitator superfamily domain, general substrate transporter)
gwf2_scaffold_33_52
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(64133..64570)
DNA (438bp) protein (146aa)
Endoribonuclease YbeY n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=YBEY_ACHLI
hypothetical protein; K07042 probable rRNA maturation factor Tax=PER_GWF2_39_17
hypothetical protein
UPF0054 (db=PatternScan db_id=PS01306 from=114 to=124 evalue=0.0 interpro_id=IPR020549 interpro_description=Uncharacterised protein family UPF0054, conserved site GO=Molecular Function: metal ion binding (GO:0046872))
gwf2_scaffold_33_53
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

64869..65474
DNA (606bp) protein (202aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=198)
coiled-coil (db=Coil db_id=coil from=101 to=122 evalue=NA)
gwf2_scaffold_33_54
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(65507..67051)
DNA (1545bp) protein (515aa)
aminotransferase class I and II; K09758 aspartate 4-decarboxylase [EC:4.1.1.12] Tax=PER_GWF2_39_17
Aspartate 4-decarboxylase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K743_HALHC
aspartate 4-decarboxylase
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=137 to=514 evalue=1.1e-27)
gwf2_scaffold_33_55
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(67120..67605)
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR09217.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
seg (db=Seg db_id=seg from=88 to=112)
gwf2_scaffold_33_56
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

67732..67890
DNA (159bp) protein (53aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_57
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

67947..68495
DNA (549bp) protein (183aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_58
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

68559..68759
DNA (201bp) protein (67aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=41 to=52)
gwf2_scaffold_33_59
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(68789..69349)
DNA (561bp) protein (187aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=11 to=25)
gwf2_scaffold_33_60
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(69415..70542)
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ n=8 Tax=Clostridium difficile RepID=DNAJ_CLOD6 rbh
dnaJ; chaperone protein; K03686 molecular chaperone DnaJ Tax=PER_GWF2_39_17
dnaJ; Chaperone protein DnaJ
DNAJ_1 (db=PatternScan db_id=PS00636 from=46 to=65 evalue=0.0 interpro_id=IPR018253 interpro_description=Heat shock protein DnaJ, conserved site GO=Molecular Function: heat shock protein binding (GO:0031072))
Displaying items 31-60 of 206 in total

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