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gwf2_scaffold_33

Alias: PER_GWF2_39_17_1

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Displaying items 181-206 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_33_181
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

215395..216063
DNA (669bp) protein (223aa)
3-dehydroquinate dehydratase, type I (EC:4.2.1.10); K03785 3-dehydroquinate dehydratase I [EC:4.2.1.10] Tax=PER_GWF2_39_17
Similar to 3-dehydroquinate dehydratase / shikimate 5-dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0M3_9BACT
3-dehydroquinate dehydratase
3-DEHYDROQUINATE DEHYDRATASE (db=HMMPanther db_id=PTHR21088 from=18 to=220 evalue=1.0e-12)
gwf2_scaffold_33_182
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

216113..217207
DNA (1095bp) protein (365aa)
GTP-binding protein YchF n=2 Tax=Burkholderiales RepID=D9Y2Z4_9BURK rbh
GTP-dependent nucleic acid-binding protein EngD {ECO:0000313|EMBL:KKR09344.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
GTP-binding protein YchF
coiled-coil (db=Coil db_id=coil from=131 to=159 evalue=NA)
gwf2_scaffold_33_183
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(217237..218886)
DNA (1650bp) protein (550aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR09345.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
seg (db=Seg db_id=seg from=179 to=188)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=517 to=547 evalue=6.7e-06)
gwf2_scaffold_33_184
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

219052..219801
DNA (750bp) protein (250aa)
Transcriptional regulator, TrmB n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2K1S5_MARM1
Transcriptional regulator TrmB {ECO:0000313|EMBL:KKR25446.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
transcriptional regulator TrmB
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=9 to=102 evalue=0.00014 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
gwf2_scaffold_33_185
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(219840..219959)
DNA (120bp) protein (40aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=2 to=38)
gwf2_scaffold_33_186
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(220300..221142)
DNA (843bp) protein (281aa)
probable rhamnose biosynthetic enzyme 1-like; K12451 3,5-epimerase/4-reductase [EC:5.1.3.- 1.1.1.-] Tax=PER_GWF2_39_17
Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=F6HUI7_VITVI
dTDP-4-dehydrorhamnose reductase
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF2 from=5 to=271 evalue=1.6e-55)
gwf2_scaffold_33_187
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

221231..221611
DNA (381bp) protein (127aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_188
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

221715..225464
DNA (3750bp) protein (1250aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=122 to=157 evalue=NA)
seg (db=Seg db_id=seg from=773 to=784)
gwf2_scaffold_33_189
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

225478..226458
DNA (981bp) protein (327aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=230 to=258 evalue=NA)
gwf2_scaffold_33_190
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

226606..226950
DNA (345bp) protein (115aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=7 to=23)
gwf2_scaffold_33_191
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(227020..227298)
DNA (279bp) protein (93aa)
Ferredoxin n=1 Tax=Grimontia sp. AK16 RepID=R1GLQ4_9GAMM
ferredoxin Tax=PER_GWF2_39_17
ferredoxin
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=36 to=44 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
gwf2_scaffold_33_192
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

227334..227588
DNA (255bp) protein (85aa)
6-O-methylguanine-DNA methyltransferase-like protein ; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=PER_GWF2_39_17
6-O-methylguanine-DNA methyltransferase-like protein n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0C3_UNCTG
6-O-methylguanine-DNA methyltransferase-like protein
MGMT (db=PatternScan db_id=PS00374 from=52 to=58 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_33_193
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(227633..228202)
DNA (570bp) protein (190aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_194
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

228324..228830
DNA (507bp) protein (169aa)
ThiJ/PfpI domain-containing protein n=2 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C2U9_THESO
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:KKR09356.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
ThiJ/PfpI domain-containing protein
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=3 to=166 evalue=2.2e-33)
gwf2_scaffold_33_195
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

229001..229804
DNA (804bp) protein (268aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_196
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(229806..230672)
DNA (867bp) protein (289aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta, 2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:KKR25545.1}; EC=1.2.7.3 {ECO:0000313|EMBL:KKR25545.1};; TaxID=161906
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta (EC:1.2.7.3)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THE7_CALNY rbh
seg (db=Seg db_id=seg from=88 to=102)
gwf2_scaffold_33_197
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(230679..231011)
DNA (333bp) protein (111aa)
Sulfurtransferase n=1 Tax=Streptomyces sp. AA4 RepID=D9VHA7_9ACTO
rhodanese-like protein Tax=PER_GWF2_39_17
sulfurtransferase
RHODANESE_1 (db=PatternScan db_id=PS00380 from=31 to=42 evalue=0.0 interpro_id=IPR001307 interpro_description=Thiosulphate sulfurtransferase, conserved site GO=Molecular Function: thiosulfate sulfurtransferase activity (GO:0004792))
gwf2_scaffold_33_198
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(231101..232855)
DNA (1755bp) protein (585aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGF2_9EURY rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR25543.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
seg (db=Seg db_id=seg from=91 to=103)
gwf2_scaffold_33_199
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(232894..233502)
DNA (609bp) protein (203aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=PER_GWF2_39_17
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EX01_9FIRM
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=5 to=202 evalue=2.0e-53 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
gwf2_scaffold_33_200
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

233850..234434
DNA (585bp) protein (195aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwf2_scaffold_33_201
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

234543..234836
DNA (294bp) protein (98aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=16 to=22)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=15 evalue=5.0)
gwf2_scaffold_33_202
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

234891..236252
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=2 Tax=Micromonospora RepID=E8S150_MICSL
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF01476 from=342 to=379 evalue=0.00014 interpro_id=IPR018392 interpro_description=Peptidoglycan-binding lysin domain GO=Biological Process: cell wall macromolecule catabolic process (GO:0016998))
gwf2_scaffold_33_203
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

236357..237064
DNA (708bp) protein (236aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwf2_scaffold_33_204
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

237091..237750
DNA (660bp) protein (220aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=42 to=53)
gwf2_scaffold_33_205
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(237752..238360)
DNA (609bp) protein (203aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=3 to=20)
gwf2_scaffold_33_206
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(238376..240280)
DNA (1905bp) protein (635aa)
hypothetical protein Bm3-1_06661 n=1 Tax=Bacillus sp. m3-13 RepID=UPI0001E89202
hypothetical protein Bm3-1_06661 Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=36 to=53)
Displaying items 181-206 of 206 in total

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