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gwf2_scaffold_33

Alias: PER_GWF2_39_17_1

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Displaying items 91-120 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_33_91
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

110581..110748
DNA (168bp) protein (56aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_92
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(110731..112059)
DNA (1329bp) protein (443aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=7 to=17)
gwf2_scaffold_33_93
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

112205..112918
DNA (714bp) protein (238aa)
Predicted Permease n=1 Tax=Polaribacter irgensii 23-P RepID=A4C363_9FLAO
hypothetical protein; K07090 Tax=PER_GWF2_39_17
sulfur compound export membrane protein TauE-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwf2_scaffold_33_94
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

112918..113358
DNA (441bp) protein (147aa)
SsrA-binding protein n=1 Tax=Lactobacillus coryniformis subsp. coryniformis CECT 5711 RepID=J3EPX1_9LACO
SsrA RNA (TmRNA)-binding protein, SsrA-binding protein {ECO:0000313|EMBL:KKR09256.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
smpB; ssrA RNA (tmRNA)-binding protein
SSRP (db=PatternScan db_id=PS01317 from=21 to=33 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site)
gwf2_scaffold_33_95
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

113453..114202
DNA (750bp) protein (250aa)
nadE; NAD synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=PER_GWF2_39_17
nadE; NAD+ synthase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46A48_METBF
seg (db=Seg db_id=seg from=116 to=130)
gwf2_scaffold_33_96
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(114218..121783)
DNA (7566bp) protein (2522aa)
Putative uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP38_9BACT
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
no description (db=Gene3D db_id=G3DSA:2.60.40.30 from=1066 to=1173 evalue=0.00021)
gwf2_scaffold_33_97
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(121875..127385)
DNA (5511bp) protein (1837aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FIE2_DESAA
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_33_98
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

127538..128059
DNA (522bp) protein (174aa)
nicotinamide-nucleotide adenylyltransferase; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=PER_GWF2_39_17
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9H4_METCZ
nicotinamide-nucleotide adenylyltransferase
cyt_tran_rel: cytidyltransferase-related (db=HMMTigr db_id=TIGR00125 from=5 to=68 evalue=1.1e-13 interpro_id=IPR004821 interpro_description=Cytidyltransferase-related GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058))
gwf2_scaffold_33_99
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

128064..129482
DNA (1419bp) protein (473aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=PER_GWF2_39_17
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGH6_CLOAI rbh
PGM_PMM (db=PatternScan db_id=PS00710 from=101 to=110 evalue=0.0 interpro_id=IPR016066 interpro_description=Alpha-D-phosphohexomutase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287))
gwf2_scaffold_33_100
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

129479..129673
DNA (195bp) protein (65aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=6 to=14)
gwf2_scaffold_33_101
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(129734..131008)
DNA (1275bp) protein (425aa)
NusA antitermination factor n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRG2_ACEAZ rbh
NusA antitermination factor, N utilization substance protein A {ECO:0000313|EMBL:KKR09263.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_1
NusA antitermination factor
no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=1 to=135 evalue=1.9e-35 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554))
gwf2_scaffold_33_102
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(131079..131588)
DNA (510bp) protein (170aa)
Regulatory protein RecX n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFS4_9CHLR
regulatory protein RecX; K03565 regulatory protein Tax=PER_GWF2_39_17
recX; regulatory protein RecX
(db=HMMPfam db_id=PF02631 from=52 to=164 evalue=1.2e-21 interpro_id=IPR003783 interpro_description=Regulatory protein RecX GO=Biological Process: regulation of DNA repair (GO:0006282))
gwf2_scaffold_33_103
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(131588..132592)
DNA (1005bp) protein (335aa)
Protein RecA n=1 Tax=Clostridium ultunense Esp RepID=M1ZGX9_9CLOT rbh
recA; recombinase A; K03553 recombination protein RecA Tax=PER_GWF2_39_17
Protein RecA
RECA_1 (db=PatternScan db_id=PS00321 from=213 to=221 evalue=0.0 interpro_id=IPR020584 interpro_description=DNA recombination/repair protein RecA, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA metabolic process (GO:0006259), Molecular Function: DNA-dependent ATPase activity (GO:0008094))
gwf2_scaffold_33_104
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(132771..133007)
DNA (237bp) protein (79aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_105
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(133018..133671)
DNA (654bp) protein (218aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=36)
seg (db=Seg db_id=seg from=72 to=86)
gwf2_scaffold_33_106
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

133765..134874
DNA (1110bp) protein (370aa)
Glycosyl transferase group 1 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L0E6_9EURY
group 1 glycosyl transferase Tax=PER_GWF2_39_17
group 1 glycosyl transferase
(db=HMMPfam db_id=PF00534 from=183 to=346 evalue=2.8e-39 interpro_id=IPR001296 interpro_description=Glycosyl transferase, family 1 GO=Biological Process: biosynthetic process (GO:0009058))
gwf2_scaffold_33_107
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

134897..135784
DNA (888bp) protein (296aa)
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=PER_GWF2_39_17
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEP6_GEOUR
ATP-NAD/AcoX kinase
seg (db=Seg db_id=seg from=180 to=191)
gwf2_scaffold_33_108
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(135817..137415)
DNA (1599bp) protein (533aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=PER_GWF2_39_17
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z688_CYAAP rbh
lysS_arch: lysyl-tRNA synthetase (db=HMMTigr db_id=TIGR00467 from=1 to=532 evalue=1.8e-97 interpro_id=IPR002904 interpro_description=Lysyl-tRNA synthetase, class I GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: lysine-tRNA ligase activity (GO:0004824), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: lysyl-tRNA aminoacylation (GO:0006430))
gwf2_scaffold_33_109
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(137443..138831)
DNA (1389bp) protein (463aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=PER_GWF2_39_17
Replicative DNA helicase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSV0_9BACT rbh
replicative DNA helicase
no description (db=HMMSmart db_id=SM00382 from=204 to=403 evalue=0.00019 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))
gwf2_scaffold_33_110
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

139010..139597
DNA (588bp) protein (196aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_33_111
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(139835..140980)
DNA (1146bp) protein (382aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YZD4_AEQSU rbh
hypothetical protein; K07133 Tax=PER_GWF2_39_17
putative ATPase (AAA+ superfamily)
seg (db=Seg db_id=seg from=2 to=13)
gwf2_scaffold_33_112
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(141347..142990)
DNA (1644bp) protein (548aa)
Putative lipoprotein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=J2AMD9_9DELT
Lipoprotein {ECO:0000313|EMBL:KKR09274.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
lipoprotein
seg (db=Seg db_id=seg from=56 to=68)
gwf2_scaffold_33_113
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

143286..143690
DNA (405bp) protein (135aa)
UPI00019B01B7 related cluster n=1 Tax=unknown RepID=UPI00019B01B7
hypothetical protein; K07460 putative endonuclease Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=2 to=11)
gwf2_scaffold_33_114
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

143698..144780
DNA (1083bp) protein (361aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_33_115
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(144727..145320)
DNA (594bp) protein (198aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=19)
seg (db=Seg db_id=seg from=3 to=18)
gwf2_scaffold_33_116
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(145381..146769)
DNA (1389bp) protein (463aa)
Protein of unknown function DUF2142, membrane Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
seg (db=Seg db_id=seg from=256 to=260)
(db=HMMPfam db_id=PF09913 from=43 to=415 evalue=2.6e-16 interpro_id=IPR018674 interpro_description=Protein of unknown function DUF2142, membrane)
gwf2_scaffold_33_117
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

146789..149674
DNA (2886bp) protein (962aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=329 to=351)
seg (db=Seg db_id=seg from=340 to=366)
gwf2_scaffold_33_118
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

149708..150103
DNA (396bp) protein (132aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
seg (db=Seg db_id=seg from=99 to=120)
gwf2_scaffold_33_119
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

150084..150476
DNA (393bp) protein (131aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=11 to=26)
gwf2_scaffold_33_120
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

150530..151825
DNA (1296bp) protein (432aa)
wecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase (EC:1.1.1.-); K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-] Tax=PER_GWF2_39_17
wecC; UDP-N-acetyl-D-mannosaminuronate dehydrogenase (EC:1.1.1.-)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IYP7_HERSS rbh
seg (db=Seg db_id=seg from=73 to=91)
Displaying items 91-120 of 206 in total

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