ggKbase home page

gwf2_scaffold_33

Alias: PER_GWF2_39_17_1

Search features with annotation key words

Displaying items 151-180 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_33_151
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(184362..185033)
DNA (672bp) protein (224aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=2 to=14)
gwf2_scaffold_33_152
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

185156..186262
DNA (1107bp) protein (369aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=160 to=181 evalue=NA)
gwf2_scaffold_33_153
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(186425..187051)
DNA (627bp) protein (209aa)
Phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase {ECO:0000313|EMBL:KKR09315.1}; EC=3.5.4.19 {ECO:0000313|EMBL:KKR09315.1};; EC=3.6.1.31 {E
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
Phosphoribosyl-AMP cyclohydrolase;Phosphoribosyl-ATP diphosphatase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D117_HALOH
HISTIDINOL DEHYDROGENASE (HDH) (db=HMMPanther db_id=PTHR21256 from=15 to=206 evalue=1.7e-54)
gwf2_scaffold_33_154
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(187063..188511)
DNA (1449bp) protein (483aa)
imidazoleglycerol phosphate synthase, cyclase subunit; K02500 cyclase [EC:4.1.3.-] Tax=PER_GWF2_39_17
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium ultunense Esp RepID=M1Z550_9CLOT rbh
imidazoleglycerol phosphate synthase, cyclase subunit
TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosp (db=HMMTigr db_id=TIGR00007 from=3 to=234 evalue=1.9e-90 interpro_id=IPR006063 interpro_description=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity (GO:0003949))
gwf2_scaffold_33_155
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(188508..189095)
DNA (588bp) protein (196aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=PER_GWF2_39_17
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Rahnella RepID=E8XXY1_RAHSY
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=3 to=193 evalue=1.2e-64)
gwf2_scaffold_33_156
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(189092..189694)
DNA (603bp) protein (201aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=PER_GWF2_39_17
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K6Q9_HALHC
imidazoleglycerol-phosphate dehydratase
IGP_DEHYDRATASE_1 (db=PatternScan db_id=PS00954 from=65 to=78 evalue=0.0 interpro_id=IPR020565 interpro_description=Imidazoleglycerol-phosphate dehydratase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: imidazoleglycerol-phosphate dehydratase activity (GO:0004424))
gwf2_scaffold_33_157
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(189819..190316)
DNA (498bp) protein (166aa)
hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19); K01089 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] Tax=PER_GWF
hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis bifunctional protein HisB n=1 Tax=Blochmannia floridanus RepID=HIS7_BLOFL
HIS7-RELATED (db=HMMPanther db_id=PTHR23133:SF3 from=7 to=150 evalue=1.8e-24)
gwf2_scaffold_33_158
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(190328..191377)
DNA (1050bp) protein (350aa)
histidinol phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=PER_GWF2_39_17
histidinol phosphate aminotransferase (EC:2.6.1.9)
Histidinol phosphate aminotransferase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21M05_SACD2
AA_TRANSFER_CLASS_2 (db=PatternScan db_id=PS00599 from=208 to=217 evalue=0.0 interpro_id=IPR001917 interpro_description=Aminotransferase, class-II, pyridoxal-phosphate binding site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity (GO:0016740))
gwf2_scaffold_33_159
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(191467..192756)
DNA (1290bp) protein (430aa)
hisD; histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=PER_GWF2_39_17
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLA1_9SPHI rbh
HISOL_DEHYDROGENASE (db=PatternScan db_id=PS00611 from=228 to=260 evalue=0.0 interpro_id=IPR001692 interpro_description=Histidinol dehydrogenase, conserved site GO=Biological Process: histidine biosynthetic process (GO:0000105), Molecular Function: histidinol dehydrogenase activity (GO:0004399), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_33_160
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(192761..193366)
DNA (606bp) protein (202aa)
ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=PER_GWF2_39_17
ATP phosphoribosyltransferase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2Y7_SPHS2
ATP phosphoribosyltransferase
ATP_P_PHORIBOSYLTR (db=PatternScan db_id=PS01316 from=145 to=166 evalue=0.0 interpro_id=IPR018198 interpro_description=ATP phosphoribosyltransferase, conserved site GO=Molecular Function: ATP phosphoribosyltransferase activity (GO:0003879))
gwf2_scaffold_33_161
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(193363..194652)
DNA (1290bp) protein (430aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=PER_GWF2_39_17
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJE9_PLABD rbh
seg (db=Seg db_id=seg from=204 to=220)
gwf2_scaffold_33_162
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(194765..195052)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AD56_CARHZ
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
yecD_yerC: TrpR homolog YerC/YecD (db=HMMTigr db_id=TIGR02531 from=9 to=93 evalue=2.7e-29 interpro_id=IPR013368 interpro_description=TrpR homologue YerC/YecD)
gwf2_scaffold_33_163
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(195142..195708)
DNA (567bp) protein (189aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=11 to=25)
gwf2_scaffold_33_164
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(195748..196638)
DNA (891bp) protein (297aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=2 Tax=Brevibacillus RepID=J2GBD2_9BACL
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=236 to=251)
gwf2_scaffold_33_165
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(196653..197519)
DNA (867bp) protein (289aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN98_9CLOT
family 2 glycosyl transferase Tax=PER_GWF2_39_17
glycosyl transferase family 2
seg (db=Seg db_id=seg from=245 to=265)
gwf2_scaffold_33_166
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(197529..198875)
DNA (1347bp) protein (449aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=PER_GWF2_39_17
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Pyrococcus furiosus RepID=Q8U459_PYRFU
glucose-1-phosphate thymidylyltransferase
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=23 to=372 evalue=1.2e-20)
gwf2_scaffold_33_167
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

199002..199481
DNA (480bp) protein (160aa)
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=PER_GWF2_39_17
Thiol peroxidase n=1 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=Q12ZM8_METBU
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=156 evalue=1.3e-56 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
gwf2_scaffold_33_168
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(199522..200646)
DNA (1125bp) protein (375aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY rbh
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein, 5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:00003
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
(db=HMMPfam db_id=PF06849 from=17 to=150 evalue=4.5e-36 interpro_id=IPR010672 interpro_description=IMP biosynthesis enzyme PurP, N-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ATP binding (GO:0005524), Biological Process: IMP biosynthetic process (GO:0006188), Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
gwf2_scaffold_33_169
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(200716..201963)
DNA (1248bp) protein (416aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=158 to=186 evalue=NA)
seg (db=Seg db_id=seg from=289 to=300)
gwf2_scaffold_33_170
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(201992..202720)
DNA (729bp) protein (243aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=64 to=79)
gwf2_scaffold_33_171
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(202810..203832)
DNA (1023bp) protein (341aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] Tax=PER_GWF2_39_17
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZJJ4_THELI rbh
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
(db=HMMPfam db_id=PF06973 from=170 to=339 evalue=1.7e-70 interpro_id=IPR009720 interpro_description=IMP biosynthesis enzyme PurP, C-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ATP binding (GO:0005524), Biological Process: IMP biosynthetic process (GO:0006188), Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
gwf2_scaffold_33_172
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(203885..204817)
DNA (933bp) protein (311aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=PER_GWF2_39_17
Protease HtpX homolog n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SI01_9BACT
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
gwf2_scaffold_33_173
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(204843..205436)
DNA (594bp) protein (198aa)
LemA family protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBB3_ELUMP
LemA family protein, LemA protein {ECO:0000313|EMBL:KKR09335.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
LemA family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwf2_scaffold_33_174
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(205497..206267)
DNA (771bp) protein (257aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=PER_GWF2_39_17
Undecaprenyl-diphosphatase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ABS6_THEID
undecaprenol kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_33_175
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(206429..207136)
DNA (708bp) protein (236aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=58 to=70)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=26 evalue=5.0)
gwf2_scaffold_33_176
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(207260..208831)
DNA (1572bp) protein (524aa)
Bifunctional purine biosynthesis protein PurH (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=PER_GWF2_39_17
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E4H8_FLESM rbh
seg (db=Seg db_id=seg from=117 to=132)
gwf2_scaffold_33_177
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(208847..209125)
DNA (279bp) protein (93aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY87_ANATU
Uncharacterized protein {ECO:0000313|EMBL:KKR25683.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
TIGR00278: conserved hypothetical protein Y (db=HMMTigr db_id=TIGR00278 from=11 to=90 evalue=3.3e-17 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
gwf2_scaffold_33_178
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(209212..210174)
DNA (963bp) protein (321aa)
Peptidase M23 family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZP0_CALAS
peptidase M23 family protein Tax=PER_GWF2_39_17
peptidase M23 family protein
seg (db=Seg db_id=seg from=2 to=11)
gwf2_scaffold_33_179
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

210629..212449
DNA (1821bp) protein (607aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT rbh
GTP-binding protein LepA, GTP-binding protein LepA {ECO:0000313|EMBL:KKR09341.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
lepA; GTP-binding protein LepA
lepA: GTP-binding protein LepA (db=HMMTigr db_id=TIGR01393 from=6 to=606 evalue=0.0 interpro_id=IPR006297 interpro_description=Elongation factor 4 GO=Molecular Function: GTP binding (GO:0005525))
gwf2_scaffold_33_180
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(212446..215052)
DNA (2607bp) protein (869aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=448 to=462)
Displaying items 151-180 of 206 in total

View Taxonomy