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gwf2_scaffold_174

Alias: PER_GWF2_39_17_2

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Displaying items 91-99 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_174_91
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

110531..112081
DNA (1551bp) protein (517aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C777_SPHTD
cell envelope-related transcriptional attenuator Tax=PER_GWF2_39_17
cell envelope-related transcriptional attenuator
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=72)
gwf2_scaffold_174_92
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

112095..112799
DNA (705bp) protein (235aa)
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXB2_CLOA9
ribosomal large subunit pseudouridine synthase B Tax=PER_GWF2_39_17
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866))
gwf2_scaffold_174_93
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

112939..113841
DNA (903bp) protein (301aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=PER_GWF2_39_17
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium ultunense Esp RepID=M1ZCL4_9CLOT
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=42 to=296 evalue=1.2e-68 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
gwf2_scaffold_174_94
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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113838..114905
DNA (1068bp) protein (356aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase, phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:KKR23383.1}; EC=2.7.8.13 {ECO:0000313|EMBL:KKR23383.1};; TaxID=1619064 species="B
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L278_THERP
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwf2_scaffold_174_95
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(114902..116833)
DNA (1932bp) protein (644aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
seg (db=Seg db_id=seg from=26 to=38)
gwf2_scaffold_174_96
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(116860..117468)
DNA (609bp) protein (203aa)
RNA polymerase sigma factor n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECK9_9CHLR
AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=PER_GWF2_39_17
AdsA-like sigma factor
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=23 to=106 evalue=1.5e-16)
gwf2_scaffold_174_97
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(117558..118472)
DNA (915bp) protein (305aa)
Inositol phosphatase/fructose-16-bisphosphatase, fructose-1,6-bisphosphatase I {ECO:0000313|EMBL:KKR09131.1}; EC=3.1.3.11 {ECO:0000313|EMBL:KKR09131.1};; TaxID=1619067 species="Bacteria; Peregrinibact
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=F16PA_PELCD
inositol phosphatase/fructose-16-bisphosphatase
FBPASE (db=PatternScan db_id=PS00124 from=240 to=252 evalue=0.0 interpro_id=IPR020548 interpro_description=Fructose-1,6-bisphosphatase, active site GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: phosphoric ester hydrolase activity (GO:0042578))
gwf2_scaffold_174_98
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(118504..119511)
DNA (1008bp) protein (336aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=PER_GWF2_39_17
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde 3-phosphate dehydrogenase A n=15 Tax=Clostridium RepID=A5I0T7_CLOBH
GAPDH (db=PatternScan db_id=PS00071 from=150 to=157 evalue=0.0 interpro_id=IPR020830 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase, active site GO=Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_174_99
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(119533..120672)
DNA (1140bp) protein (380aa)
fbaA; fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=PER_GWF2_39_17
fructose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=1 Tax=Haemophilus somnus (strain 2336) RepID=B0USQ6_HAES2
seg (db=Seg db_id=seg from=155 to=167)
Displaying items 91-99 of 99 in total

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