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gwf2_scaffold_550

Alias: PER_GWF2_38_29_4

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Displaying items 61-90 of 124 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_550_61
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(67385..68335)
DNA (951bp) protein (317aa)
transmembrane_regions Tax=PER_GWF2_38_29
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=19)
gwf2_scaffold_550_62
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(68345..69346)
DNA (1002bp) protein (334aa)
MGPA protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WB27_FUSMR
MgpA protein; K06881 phosphoesterase RecJ domain-containing protein Tax=PER_GWF2_38_29
MgpA protein
seg (db=Seg db_id=seg from=283 to=294)
gwf2_scaffold_550_63
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

69482..70426
DNA (945bp) protein (315aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=PER_GWF2_38_29
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0J3_DESTD
GART (db=PatternScan db_id=PS00373 from=135 to=158 evalue=0.0 interpro_id=IPR001555 interpro_description=Phosphoribosylglycinamide formyltransferase, active site GO=Molecular Function: methyltransferase activity (GO:0008168))
gwf2_scaffold_550_64
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(70407..71903)
DNA (1497bp) protein (499aa)
Periplasmic binding protein-like II Tax=PER_GWF2_38_29
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=24 to=470 evalue=4.7e-28)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=25 evalue=5.0)
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=35 to=429 evalue=5.5e-11)
gwf2_scaffold_550_65
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(72007..72219)
DNA (213bp) protein (71aa)
Regulatory protein, FmdB family n=1 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C345_THESO
FmdB family regulatory protein Tax=PER_GWF2_38_29
FmdB family regulatory protein
no description (db=HMMSmart db_id=SM00834 from=1 to=42 evalue=2.0e-09 interpro_id=IPR013429 interpro_description=Regulatory protein, FmdB, putative)
gwf2_scaffold_550_66
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(72227..73156)
DNA (930bp) protein (310aa)
Glycosyl transferase, family 2 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6B1_GEOUR
glycosyl transferase family protein Tax=PER_GWF2_38_29
glycosyl transferase family protein
(db=HMMPfam db_id=PF00535 from=4 to=109 evalue=1.2e-25 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
gwf2_scaffold_550_67
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(73166..73549)
DNA (384bp) protein (128aa)
Single-stranded DNA-binding protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AU24_CHLCH
Single-strand binding protein, single-strand DNA-binding protein {ECO:0000313|EMBL:KKQ69024.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38
single-strand binding protein
seg (db=Seg db_id=seg from=113 to=127)
gwf2_scaffold_550_68
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

73641..74252
DNA (612bp) protein (204aa)
Riboflavin synthase subunit alpha, riboflavin synthase {ECO:0000313|EMBL:KKQ69025.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KKQ69025.1};; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrini
riboflavin synthase subunit alpha n=1 Tax=Lactobacillus versmoldensis KCTC 3814 RepID=UPI000249322A
riboflavin synthase subunit alpha
seg (db=Seg db_id=seg from=112 to=120)
gwf2_scaffold_550_69
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

74239..74694
DNA (456bp) protein (152aa)
6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=PER_GWF2_38_29
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFT9_NITSI
6,7-dimethyl-8-ribityllumazine synthase
seg (db=Seg db_id=seg from=71 to=82)
gwf2_scaffold_550_70
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

74721..75911
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase, phosphoglycerate kinase {ECO:0000313|EMBL:KKQ69027.1}; EC=2.7.2.3 {ECO:0000313|EMBL:KKQ69027.1};; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacter
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYG2_HALOH rbh
PHOSPHOGLYCERATE KINASE (db=HMMPanther db_id=PTHR11406 from=4 to=396 evalue=1.5e-172 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
gwf2_scaffold_550_71
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(75898..76533)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=5 to=155 evalue=0.00037)
gwf2_scaffold_550_72
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(76473..78221)
DNA (1749bp) protein (583aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_550_73
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(78205..78636)
DNA (432bp) protein (144aa)
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=PER_GWF2_38_29
Putative Holliday junction resolvase n=2 Tax=Lachnoanaerobaculum saburreum RepID=E6LRA3_9FIRM
Holliday junction resolvase-like protein
no description (db=HMMSmart db_id=SM00732 from=4 to=104 evalue=1.0e-20 interpro_id=IPR006641 interpro_description=YqgF/RNase H-like domain GO=Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
gwf2_scaffold_550_74
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists


comp(78643..79095)
DNA (453bp) protein (151aa)
50S ribosomal protein L9 n=1 Tax=Clostridium ultunense Esp RepID=M1YQM6_9CLOT
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=PER_GWF2_38_29
50S ribosomal protein L9
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
gwf2_scaffold_550_75
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(79167..80825)
DNA (1659bp) protein (553aa)
Extracellular solute-binding protein family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEG0_9CHLR
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=PER_GWF2_38_29
family 5 extracellular solute-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
gwf2_scaffold_550_76
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(80830..81048)
DNA (219bp) protein (73aa)
Preprotein translocase, SecG subunit n=7 Tax=Dehalococcoides mccartyi RepID=A5FPJ9_DEHSB
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=PER_GWF2_38_29
preprotein translocase subunit SecG
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_550_77
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(81051..81428)
DNA (378bp) protein (126aa)
Membrane protein n=1 Tax=uncultured bacterium A1Q1_fos_517 RepID=L7VZH9_9BACT
hypothetical protein; K08972 putative membrane protein Tax=PER_GWF2_38_29
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
gwf2_scaffold_550_78
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(81434..84568)
DNA (3135bp) protein (1045aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=PER_GWF2_38_29
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Treponema sp. JC4 RepID=I0X629_9SPIO rbh
ISOLEUCYL TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11946:SF9 from=10 to=868 evalue=0.0 interpro_id=IPR023585 interpro_description=Isoleucyl-tRNA synthetase, type 1 GO=Molecular Function: isoleucine-tRNA ligase activity (GO:0004822))
gwf2_scaffold_550_79
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(84645..85982)
DNA (1338bp) protein (446aa)
Adenylosuccinate lyase, adenylosuccinate lyase {ECO:0000313|EMBL:KKQ69036.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KKQ69036.1};; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JRE6_9GAMM rbh
FUMARATE_LYASES (db=PatternScan db_id=PS00163 from=291 to=300 evalue=0.0 interpro_id=IPR020557 interpro_description=Fumarate lyase, conserved site GO=Molecular Function: catalytic activity (GO:0003824))
gwf2_scaffold_550_80
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(86002..86457)
DNA (456bp) protein (152aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=PER_GWF2_38_29
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHX2_SPICD
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
seg (db=Seg db_id=seg from=119 to=129)
gwf2_scaffold_550_81
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(86468..87433)
DNA (966bp) protein (322aa)
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=PER_GWF2_38_29
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZV7_SORC5 rbh
(db=HMMPfam db_id=PF01259 from=27 to=282 evalue=1.1e-71 interpro_id=IPR001636 interpro_description=SAICAR synthetase GO=Molecular Function: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (GO:0004639), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
gwf2_scaffold_550_82
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(87659..88624)
DNA (966bp) protein (322aa)
putative polysaccharide deacetylase (EC:3.-.-.-) Tax=PER_GWF2_38_29
putative polysaccharide deacetylase (EC:3.-.-.-)
Polysaccharide deacetylase family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJJ9_9FIRM
coiled-coil (db=Coil db_id=coil from=234 to=255 evalue=NA)
gwf2_scaffold_550_83
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

88657..89931
DNA (1275bp) protein (425aa)
adenylosuccinate synthase (ISS); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=PER_GWF2_38_29
Adenylosuccinate synthetase, chloroplastic n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YVA0_9CHLO rbh
PurA; adenylosuccinate synthetase
seg (db=Seg db_id=seg from=239 to=260)
gwf2_scaffold_550_84
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

89991..91790
DNA (1800bp) protein (600aa)
GTP-binding protein TypA n=4 Tax=Thermoanaerobacterium RepID=D9TNM2_THETC rbh
GTP-binding protein TypA, GTP-binding protein {ECO:0000313|EMBL:KKQ69041.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
GTP-binding protein TypA
no description (db=HMMSmart db_id=SM00838 from=394 to=481 evalue=0.0008 interpro_id=IPR000640 interpro_description=Translation elongation factor EFG/EF2, C-terminal GO=Molecular Function: GTP binding (GO:0005525))
gwf2_scaffold_550_85
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(91787..92320)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKU0_9FIRM
hypothetical protein; K07043 Tax=PER_GWF2_38_29
Predicted metal-dependent hydrolase
seg (db=Seg db_id=seg from=8 to=20)
gwf2_scaffold_550_86
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(92485..93165)
DNA (681bp) protein (227aa)
transmembrane_regions Tax=PER_GWF2_38_29
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=8 to=27)
gwf2_scaffold_550_87
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(93216..94061)
DNA (846bp) protein (282aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_88
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

94122..94244
DNA (123bp) protein (41aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_89
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(94501..95760)
DNA (1260bp) protein (420aa)
2-alkenal reductase {ECO:0000313|EMBL:KKQ69046.1}; EC=1.3.1.74 {ECO:0000313|EMBL:KKQ69046.1};; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_
2-alkenal reductase n=2 Tax=Cyanothece RepID=B7K261_CYAP8
protease Do
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwf2_scaffold_550_90
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

95860..96423
DNA (564bp) protein (188aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=PER_GWF2_38_29
5-formyltetrahydrofolate cyclo-ligase family protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0PZD6_CLONN
5-formyltetrahydrofolate cyclo-ligase
seg (db=Seg db_id=seg from=16 to=36)
Displaying items 61-90 of 124 in total

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