ggKbase home page

gwf2_scaffold_550

Alias: PER_GWF2_38_29_4

Search features with annotation key words

Displaying items 91-120 of 124 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_550_91
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

96435..97682
DNA (1248bp) protein (416aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=PER_GWF2_38_29
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H3I5_DENA2 rbh
SHMT (db=PatternScan db_id=PS00096 from=218 to=234 evalue=0.0 interpro_id=IPR019798 interpro_description=Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO=Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372), Biological Process: glycine metabolic process (GO:0006544), Biological Process: L-serine metabolic process (GO:0006563), Molecular Function: pyridoxal phosphate binding (GO:0030170))
gwf2_scaffold_550_92
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(97816..99387)
DNA (1572bp) protein (524aa)
HAMP domain-containing protein,cache domain-containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HG37_METFS
serine phosphatase; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=PER_GWF2_38_29
HAMP domain-containing protein,cache domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
gwf2_scaffold_550_93
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(99402..99572)
DNA (171bp) protein (57aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_94
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(99593..100963)
DNA (1371bp) protein (457aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium sp. MSTE9 RepID=J0N1K9_9CLOT
Periplasmic oligopeptide/nickel-binding protein Tax=PER_GWF2_38_29
Periplasmic oligopeptide/nickel-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_550_95
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(101031..102848)
DNA (1818bp) protein (606aa)
Elongation factor 4 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2N8_THEOJ rbh
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=PER_GWF2_38_29
GTP-binding protein LepA
lepA: GTP-binding protein LepA (db=HMMTigr db_id=TIGR01393 from=6 to=604 evalue=0.0 interpro_id=IPR006297 interpro_description=Elongation factor 4 GO=Molecular Function: GTP binding (GO:0005525))
gwf2_scaffold_550_96
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

103072..103512
DNA (441bp) protein (147aa)
transmembrane_regions Tax=PER_GWF2_38_29
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
gwf2_scaffold_550_97
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

103548..104252
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=2 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS15_9BACT
Type IV secretory pathway VirB4 protein Tax=PER_GWF2_38_29
hypothetical protein
gwf2_scaffold_550_98
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(104261..105310)
DNA (1050bp) protein (350aa)
DNA-cytosine methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] Tax=PER_GWF2_38_29
DNA-methyltransferase Dcm n=1 Tax=Beggiatoa alba B18LD RepID=I3CCM6_9GAMM rbh
DNA-cytosine methyltransferase
coiled-coil (db=Coil db_id=coil from=318 to=339 evalue=NA)
gwf2_scaffold_550_99
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(105314..106156)
DNA (843bp) protein (281aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme [EC:3.1.21.4] Tax=PER_GWF2_38_29
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease n=1 Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FP47_DEHSB rbh
seg (db=Seg db_id=seg from=252 to=263)
gwf2_scaffold_550_100
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(106372..107430)
DNA (1059bp) protein (353aa)
coiled-coil Tax=PER_GWF2_38_29
coiled-coil (db=Coil db_id=coil from=136 to=171 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=214 to=233)
seg (db=Seg db_id=seg from=125 to=140)
gwf2_scaffold_550_101
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(107563..107847)
DNA (285bp) protein (95aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_23S_1
unknown

Not on your lists

comp(108458..112172)
DNA (3715bp)
gwf2_scaffold_550_103_b
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(111276..111767)
DNA (492bp) protein (164aa)
LAGLIDADG homing endonuclease Tax=PER_GWF2_38_29
gwf2_scaffold_550_103
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(112495..112737)
DNA (243bp) protein (81aa)
transmembrane_regions Tax=PER_GWF2_38_29
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=46 to=57)
gwf2_scaffold_550_104
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(113078..114025)
DNA (948bp) protein (316aa)
Permease n=2 Tax=Desulfotomaculum RepID=F0DMY8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKQ69060.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
gwf2_scaffold_550_105
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

114434..115105
DNA (672bp) protein (224aa)
transmembrane_regions Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
gwf2_scaffold_550_106
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

115274..115441
DNA (168bp) protein (56aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_107
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

115600..115887
DNA (288bp) protein (96aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_108
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(115957..117195)
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFP5_9FIRM
hypothetical protein; K02004 putative ABC transport system permease protein Tax=PER_GWF2_38_29
multidrug ABC transporter substrate-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
gwf2_scaffold_550_109
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(117198..117914)
DNA (717bp) protein (239aa)
ABC transporter related n=3 Tax=Desulfitobacterium hafniense RepID=B8FPV2_DESHD
Uncharacterized protein {ECO:0000313|EMBL:KKQ69065.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
ABC transporter-like protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=144 to=158 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwf2_scaffold_550_110
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(117916..119652)
DNA (1737bp) protein (579aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GA61_CHLAD
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=PER_GWF2_38_29
RND family efflux transporter MFP subunit
coiled-coil (db=Coil db_id=coil from=161 to=182 evalue=NA)
gwf2_scaffold_550_111
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(119645..120064)
DNA (420bp) protein (140aa)
Transcriptional regulator, MarR family n=4 Tax=Thermoanaerobacter RepID=B0K976_THEP3
MarR family transcriptional regulator Tax=PER_GWF2_38_29
MarR family transcriptional regulator
seg (db=Seg db_id=seg from=120 to=135)
gwf2_scaffold_550_112
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(120395..121138)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVF4_9BACT
zinc/iron permease Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwf2_scaffold_550_113
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

121175..122830
DNA (1656bp) protein (552aa)
seg Tax=PER_GWF2_38_29
seg (db=Seg db_id=seg from=378 to=389)
gwf2_scaffold_550_114
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(122838..123317)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BH93_9EURY
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwf2_scaffold_550_115
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(123388..124125)
DNA (738bp) protein (246aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=PER_GWF2_38_29
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SW28_CLOC7
hypothetical protein
alpha/beta knot (db=superfamily db_id=SSF75217 from=74 to=244 evalue=1.6e-38)
gwf2_scaffold_550_116
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

124223..124762
DNA (540bp) protein (180aa)
Alkyl hydroperoxide reductase, peroxiredoxin (Alkyl hydroperoxide reductase subunit C) {ECO:0000313|EMBL:KKQ69072.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KKQ69072.1};; TaxID=1619066 species="Bacteria; Pere
Protein containing Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen domain n=1 Tax=sediment metagenome RepID=D9PKS3_9ZZZZ
alkyl hydroperoxide reductase
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=2 to=179 evalue=1.6e-58 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
gwf2_scaffold_550_117
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(124939..125910)
DNA (972bp) protein (324aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_550_16S_1
unknown

Not on your lists

comp(126146..127604)
DNA (1459bp)
gwf2_scaffold_550_118
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

127945..128559
DNA (615bp) protein (205aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=PER_GWF2_38_29
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUL6_BACT2
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=117)
Displaying items 91-120 of 124 in total

View Taxonomy