ggKbase home page

L1_007_000M1_scaffold_30_40

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(53220..53843)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWI7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 206.0
  • Bit_score: 273
  • Evalue 1.60e-70
CRISPR system CASCADE complex protein CasE {ECO:0000313|EMBL:ERJ96450.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 206.0
  • Bit_score: 273
  • Evalue 2.30e-70
CRISPR-associated protein, Cse3 family similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 213.0
  • Bit_score: 178
  • Evalue 1.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
ATGTATTTAACAAGAATAAAATTAGATATGACAAAAACAAATACAATGAAGGCATTGGTATGCCCAAGCAGATTTCATGGAGCTATCGAAAGTGCTGAGTCTGACGGCAGAACAAGGAAGCTTTGGAGAATAGACGAGCTTGGCGGAGAGAAGTATTTACTCATATTATCAGAAAAAGAACTTGATTTTTCAAATGTTTCAGATCAATTCGGAGCAGAAAGACCGCAAACTAAATGTTATGATACATTACTTGACAGAGTTAAAAATAGCAGTAAGTGGCAGTTTCGTTTGAAAGCAAACCCTGTTATACATAAGAAAGATACTAATTCCCACAGAGGTCGCCCTGTCGGACTTATAGGAAATAAACAGCAGGAAGAATGGCTGAAAAAGCAGGCTTTGAAAAACGGCTTTTCTCTAGAGGACGGAATGTGGCTGGTAACAGAGTTTAAGTGGTATGATTTTAAAAAGGGCGAGCGTAGAAACCATGTGAGAATACTTTCTGTAACATATGAGGGCGTGCTTACAGTAACAGACGAGGAACTTCTTAAAGTTGCACTTACTAATGGTATCGGCCGTGAGAAAGCTTATGGTCTTGGAATGCTGACGATCGTCGGAGTAAGATAA
PROTEIN sequence
Length: 208
MYLTRIKLDMTKTNTMKALVCPSRFHGAIESAESDGRTRKLWRIDELGGEKYLLILSEKELDFSNVSDQFGAERPQTKCYDTLLDRVKNSSKWQFRLKANPVIHKKDTNSHRGRPVGLIGNKQQEEWLKKQALKNGFSLEDGMWLVTEFKWYDFKKGERRNHVRILSVTYEGVLTVTDEELLKVALTNGIGREKAYGLGMLTIVGVR*