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L1_007_000M1_scaffold_30_41

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(53852..54502)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasD n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3X4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 217.0
  • Bit_score: 293
  • Evalue 9.20e-77
CRISPR system CASCADE complex protein CasD {ECO:0000313|EMBL:ERJ96449.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 217.0
  • Bit_score: 293
  • Evalue 1.30e-76
CRISPR-associated protein, Cas5e family similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 221.0
  • Bit_score: 194
  • Evalue 2.10e-47

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 651
ATGGCAGTATTATTGCTAAGACTTGCTGCCCCATTACAAGCGTGGGGCAGCAGTTCAAAATTCATTGTGCATTCAACAGAACGTGAGCCTACCAAAAGCGGCGTTATTGGCATGATAGCGGCAGCTCTTGGTATCCAGCGTAATGACGATCCGCAGAAGCTTGTGCCGCTTACAACGCTCCGTTTTGGCGTTCGTGCCGATAAGGAGGGCGTTTTGCTTAAAGATTTTCATATGGTGCATGGCTATAAGATAGCAGATGTTACAGAGCGTTATTATCTGTCAGACGCAGTGTTTCTTGTCGCACTTGAAAGTGATGATAAATCATTGCTGGAGAGTATAGCTTCTGCACTGCAAAATCCTGTTTATCCGCTGTATCTTGGACGAAAGTCCTGTCCGCCAACTTTGCCTATCGTTCTTGGCGTTAAGGGCGAGGATATCCTTACGGCACTAAAGACCGAGCCATATCTTTATAAGAACGCTCACCGAAAAAGCGTGCGCATTTCCTATGAAGTCACATCAGGCGGTGCAATGGTGCAGGATATTCCGTTGTCATTCTCACAGCTTCACAGAAAGCACGGCTGGCGAATGAAGCGTGAAGAACTTCTTGTTGTGGATAGCAACCCAGAGCATGACGCCTTTTCTAAATTGTGA
PROTEIN sequence
Length: 217
MAVLLLRLAAPLQAWGSSSKFIVHSTEREPTKSGVIGMIAAALGIQRNDDPQKLVPLTTLRFGVRADKEGVLLKDFHMVHGYKIADVTERYYLSDAVFLVALESDDKSLLESIASALQNPVYPLYLGRKSCPPTLPIVLGVKGEDILTALKTEPYLYKNAHRKSVRISYEVTSGGAMVQDIPLSFSQLHRKHGWRMKREELLVVDSNPEHDAFSKL*