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L1_007_000M1_scaffold_30_42

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(54508..55584)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasC n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MAX3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 358.0
  • Bit_score: 526
  • Evalue 1.80e-146
CRISPR system CASCADE complex protein CasC {ECO:0000313|EMBL:ERJ96448.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 358.0
  • Bit_score: 526
  • Evalue 2.60e-146
CRISPR-associated protein, Cse4 family similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 417
  • Evalue 2.60e-114

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1077
ATGAGTATTTATGTTGATATACACGTTTTGCAGACCGTACCGCCAAGCTGTGTAAACCGTGATGATACGGGTAGCCCTAAGACAGCCGTTTATGGCGGTACAAGAAGAGCAAGAGTTTCATCACAGGCTTGGAAGCACGCTATGAGAGGCGACTTCAGAAAAATATTTGCTACAGAAGAACTTGGCGTTCGCTCCCTTAAAGTGGCAGCACTTGTTGCTGATGAGATAGCCGCAATAGACAGCACTATGAGCGAAAAGTCAAGAAACAAGAAGGCAGCTGAAGCTCTTAAAGCTGCAGGAATAAGTACTAAATCCACCAAAGATGATGATTTAGAAAAGACGGACGCATTGTTCCTTATGAGCAACAAGCAGGCAAAAGAGATTGCAAAACTTGTGTGCGACGGCGAAGAAGATAAAAATGCTTATAAAAAAGCTCTGAAAGATAATCCGTCAGTAGATATCGCATTGTTCGGAAGAATGGCAGCAAGTGACCCTACGCTCAACTATGATGCCGCTGCACAGGTGGCTCATGCTATTTCTACACATACTATACAGAACGAGTATGATTATTTCACCGCAGTTGATGACCTTCAGGACGATGACAACGCAGGTGCAGGACACCTTGGAACAGTAGAGTTCAATTCCTCAACTCTTTATCGCTATGCCAACGTGAATGTGACAGAGCTTTCAAAGGCACTTGACAATTTGTATGATGCAGTTGATGTTGTGAAAAAGTATGTTGAAGCGTTCGTACGCTCAATGCCTACAGGTAAGGAGAACACTTTTGCAAACCGCACTTTCCCTGACGCTATTTATGTGACAGTTCGTAATGACCAGCCTGTTAACCTTTGCGGAGCTTTTGAGAAACCTGTCAGAGCTTCTGAAGATGGCTATGTTGCCGAGTCTGAGAGTAAACTTGTGGAGTATGCTGGAAAGGTATATGATAATTTTGCTGCTAAGCCATTGGCTGCTTTCTGCGTTGGTGACAAGTTGGCAGATATTGCCGAAAAGATGACATTTCTTGAGCTTCTTGAACGTCTGGAAGCATATCTTCGTGAGCAGACAGCAGAGGCGTAA
PROTEIN sequence
Length: 359
MSIYVDIHVLQTVPPSCVNRDDTGSPKTAVYGGTRRARVSSQAWKHAMRGDFRKIFATEELGVRSLKVAALVADEIAAIDSTMSEKSRNKKAAEALKAAGISTKSTKDDDLEKTDALFLMSNKQAKEIAKLVCDGEEDKNAYKKALKDNPSVDIALFGRMAASDPTLNYDAAAQVAHAISTHTIQNEYDYFTAVDDLQDDDNAGAGHLGTVEFNSSTLYRYANVNVTELSKALDNLYDAVDVVKKYVEAFVRSMPTGKENTFANRTFPDAIYVTVRNDQPVNLCGAFEKPVRASEDGYVAESESKLVEYAGKVYDNFAAKPLAAFCVGDKLADIAEKMTFLELLERLEAYLREQTAEA*