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L1_008_000M1_scaffold_183

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Displaying items 31-60 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_183_31
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37637..37885)
DNA (249bp) protein (83aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=2 Tax=Dorea RepID=R7FTC7_9FIRM
L1_008_000M1_scaffold_183_32
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37890..38510)
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=2 Tax=Dorea RepID=A6BEG6_9FIRM
L1_008_000M1_scaffold_183_33
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38547..39428)
DNA (882bp) protein (294aa)
TIGR00255 family protein n=2 Tax=Dorea RepID=A6BEG7_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:CDE18093.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
conserved hypothetical protein TIGR00255
L1_008_000M1_scaffold_183_34
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39555..41294
DNA (1740bp) protein (580aa)
Fibronectin-binding protein A domain protein n=2 Tax=Dorea RepID=A6BEG8_9FIRM
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EDM64007.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L1_008_000M1_scaffold_183_35
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41291..42640)
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTV5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE18091.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
MATE efflux family protein
L1_008_000M1_scaffold_183_36
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42644..43933)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BEH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18090.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_183_37
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43971..45101)
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTB6_9FIRM
Prephenate dehydratase {ECO:0000313|EMBL:CDE18085.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_38
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45283..45819
DNA (537bp) protein (179aa)
Nitroreductase family protein n=2 Tax=Dorea RepID=A6BEH2_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:EDM64011.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Nitroreductase
L1_008_000M1_scaffold_183_39
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45836..46753
DNA (918bp) protein (306aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Dorea RepID=A6BEH3_9FIRM
L1_008_000M1_scaffold_183_40
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46767..47213
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18070.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Aspartate carbamoyltransferase, regulatory subunit
L1_008_000M1_scaffold_183_41
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47712..48398)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64017.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_183_42
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48402..48872)
DNA (471bp) protein (157aa)
mog; molybdopterin adenylyltransferase Mog (EC:2.7.7.75)
Molybdenum cofactor synthesis domain protein n=2 Tax=Dorea RepID=A6BEH9_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:CDE18068.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_43
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48977..50125)
DNA (1149bp) protein (383aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWG6_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDE18067.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
iron-containing alcohol dehydrogenase
L1_008_000M1_scaffold_183_44
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50276..51748)
DNA (1473bp) protein (491aa)
Stage IV sporulation protein A n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTT6_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CDE18066.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
stage IV sporulation protein A
L1_008_000M1_scaffold_183_45
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51934..52821
DNA (888bp) protein (296aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Shikimate dehydrogenase n=2 Tax=Dorea RepID=A6BEI2_9FIRM
hypothetical protein
L1_008_000M1_scaffold_183_46
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52835..53596
DNA (762bp) protein (254aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRW1_9FIRM
L1_008_000M1_scaffold_183_47
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53711..55144)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18063.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_48
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55437..56723)
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEI5_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM64024.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_183_49
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56751..57626)
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=2 Tax=Dorea RepID=A6BEI6_9FIRM
L1_008_000M1_scaffold_183_50
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57719..59689)
DNA (1971bp) protein (657aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWF2_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE18052.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L1_008_000M1_scaffold_183_51
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59732..60490)
DNA (759bp) protein (253aa)
AP endonuclease family 2 n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTS0_9FIRM
AP endonuclease family 2 {ECO:0000313|EMBL:CDE18051.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_52
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60692..61579
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=2 Tax=Dorea RepID=A6BEI9_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDE18050.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_183_53
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61656..62666)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Dorea RepID=A6BEJ0_9FIRM
L1_008_000M1_scaffold_183_54
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62698..63351)
DNA (654bp) protein (218aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU42_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L1_008_000M1_scaffold_183_55
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63354..64682)
DNA (1329bp) protein (443aa)
GTPase Der n=2 Tax=Dorea RepID=A6BEJ2_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ribosome-associated GTPase EngA
L1_008_000M1_scaffold_183_56
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64843..66018
DNA (1176bp) protein (392aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Dorea RepID=A6BEJ3_9FIRM
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:CDE18046.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_57
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66099..67532)
DNA (1434bp) protein (478aa)
Polysaccharide deacetylase n=2 Tax=Dorea RepID=A6BEJ4_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EDM64033.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted xylanase/chitin deacetylase
L1_008_000M1_scaffold_183_58
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67635..68798)
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDM64034.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDM64034.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=2 Tax=Dorea RepID=A6BEJ5_9FIRM
L1_008_000M1_scaffold_183_59
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68801..69883)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ6_9FIRM
L1_008_000M1_scaffold_183_60
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69920..71605)
DNA (1686bp) protein (562aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ7_9FIRM
Displaying items 31-60 of 168 in total

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