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L1_008_000M1_scaffold_183

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Displaying items 121-150 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_183_121
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143584..145095)
DNA (1512bp) protein (504aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4J6_9FIRM
L1_008_000M1_scaffold_183_122
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145187..145612)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y534_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59351.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Uncharacterized conserved protein (DUF2075).
L1_008_000M1_scaffold_183_123
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146170..147045)
DNA (876bp) protein (292aa)
Elongation factor Ts n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0D9_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
translation elongation factor Ts (EF-Ts)
L1_008_000M1_scaffold_183_124
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(147079..147816)
DNA (738bp) protein (246aa)
30S ribosomal protein S2 n=2 Tax=Dorea RepID=A6BK48_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
SSU ribosomal protein S2P
L1_008_000M1_scaffold_183_125
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148062..149207)
DNA (1146bp) protein (382aa)
NlpC/P60 family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK49_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EDM61916.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000M1_scaffold_183_126
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149454..150980)
DNA (1527bp) protein (509aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.13 1.4.1.14)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1W9_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE20931.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_127
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(150993..155240)
DNA (4248bp) protein (1416aa)
Glutamate synthase domain 2 (EC:1.4.1.14 1.4.1.13)
Class II glutamine amidotransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK51_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:EDM61918.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_183_128
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155267..155521)
DNA (255bp) protein (85aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Class II glutamine amidotransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK51_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDE20930.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_129
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155648..156625)
DNA (978bp) protein (326aa)
CAAX amino terminal protease family protein n=2 Tax=Dorea RepID=A6BK52_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDE20929.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted metal-dependent membrane protease
L1_008_000M1_scaffold_183_130
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(156719..157210)
DNA (492bp) protein (164aa)
YbaK/proline--tRNA ligase associated domain protein n=2 Tax=Dorea RepID=A6BK53_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EDM61920.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
YbaK/prolyl-tRNA synthetase associated region
L1_008_000M1_scaffold_183_131
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(157225..157779)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7G4I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20927.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DNA-binding protein
L1_008_000M1_scaffold_183_132
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(157915..158859)
DNA (945bp) protein (315aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
tRNA-dihydrouridine synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1W7_9FIRM
dihydrouridine synthase family protein
L1_008_000M1_scaffold_183_133
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158882..159580)
DNA (699bp) protein (233aa)
Methyltransferase YaeB family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G194_9FIRM
Methyltransferase YaeB family {ECO:0000313|EMBL:CDE20925.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_134
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(159593..160429)
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
nfo; Endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0C9_9FIRM
L1_008_000M1_scaffold_183_135
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(160503..161552)
DNA (1050bp) protein (350aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK58_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM61925.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L1_008_000M1_scaffold_183_136
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(161565..162269)
DNA (705bp) protein (235aa)
Molybdate ABC transporter, permease protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK59_9FIRM
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EDM61926.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
molybdate ABC transporter, permease protein
L1_008_000M1_scaffold_183_137
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(162369..163259)
DNA (891bp) protein (297aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK60_9FIRM
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EDM61927.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L1_008_000M1_scaffold_183_138
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(163320..164288)
DNA (969bp) protein (323aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G191_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:CDE20920.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
molybdenum cofactor synthesis domain-containing protein
L1_008_000M1_scaffold_183_139
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(164297..165262)
DNA (966bp) protein (322aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK62_9FIRM
hypothetical protein
L1_008_000M1_scaffold_183_140
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(165259..165750)
DNA (492bp) protein (164aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK63_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
molybdenum cofactor biosynthesis protein C
L1_008_000M1_scaffold_183_141
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(165767..166993)
DNA (1227bp) protein (409aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G188_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:CDE20915.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
molybdenum cofactor synthesis domain
L1_008_000M1_scaffold_183_142
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(166996..168105)
DNA (1110bp) protein (370aa)
Molybdopterin binding domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2D4_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:CDE20913.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
moeA2; molybdopterin biosynthesis protein MoeA
L1_008_000M1_scaffold_183_143
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(168122..169243)
DNA (1122bp) protein (374aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|SAAS:SAAS00049907}; EC=2.7.7.77 {ECO:0000256|SAAS:SAAS00049907};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK66_9FIRM
bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB
L1_008_000M1_scaffold_183_144
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(169528..170145)
DNA (618bp) protein (206aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Acetyltransferase GNAT family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G185_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE20910.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_145
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(170269..171903)
DNA (1635bp) protein (545aa)
AMP-binding enzyme n=2 Tax=Dorea RepID=A6BK68_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EDM61935.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_183_146
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

172126..172851
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20907.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
L1_008_000M1_scaffold_183_147
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(172990..174171)
DNA (1182bp) protein (394aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0B2_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDE20904.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L1_008_000M1_scaffold_183_148
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174293..177916)
DNA (3624bp) protein (1208aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4G2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE20902.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_008_000M1_scaffold_183_149
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

178195..179166
DNA (972bp) protein (324aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
biotin synthase (EC:2.8.1.6)
Biotin synthase n=2 Tax=Dorea RepID=A6BK72_9FIRM
L1_008_000M1_scaffold_183_150
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(179334..179513)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BK73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61940.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
Displaying items 121-150 of 168 in total

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