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L1_008_000M1_scaffold_183

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Displaying items 91-120 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_183_91
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(107058..110354)
DNA (3297bp) protein (1099aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17996.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_92
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110483..111571
DNA (1089bp) protein (363aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Putative histidinol-phosphate transaminase n=2 Tax=Dorea RepID=A6BEN2_9FIRM
Putative histidinol-phosphate transaminase {ECO:0000313|EMBL:CDE17994.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_93
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(111699..112043)
DNA (345bp) protein (115aa)
Cupin domain protein n=2 Tax=Dorea RepID=A6BEN3_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDE17992.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_94
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(112128..114056)
DNA (1929bp) protein (643aa)
Efflux ABC transporter, permease protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEN4_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM64073.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
lipoprotein release ABC transporter permease
L1_008_000M1_scaffold_183_95
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114049..114816)
DNA (768bp) protein (256aa)
Putative bacteriocin export ABC transporter lactococcin 972 group n=2 Tax=Dorea RepID=R7FTY0_9FIRM
Putative bacteriocin export ABC transporter lactococcin 972 group {ECO:0000313|EMBL:CDE17988.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_008_000M1_scaffold_183_96
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114958..115974)
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEN6_9FIRM
integral membrane sensor signal transduction histidine kinase
L1_008_000M1_scaffold_183_97
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115971..116645)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FT12_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE17985.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator
L1_008_000M1_scaffold_183_98
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116876..117532)
DNA (657bp) protein (219aa)
Cell Wall Hydrolase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTX3_9FIRM
Cell Wall Hydrolase {ECO:0000313|EMBL:CDE17983.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Cell Wall Hydrolase.
L1_008_000M1_scaffold_183_99
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118091..121291)
DNA (3201bp) protein (1067aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=2 Tax=Dorea RepID=A6BEP0_9FIRM
L1_008_000M1_scaffold_183_100
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121291..122403)
DNA (1113bp) protein (371aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=2 Tax=Dorea RepID=A6BEP1_9FIRM
L1_008_000M1_scaffold_183_101
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122623..123882)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17979.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Transglutaminase-like superfamily.
L1_008_000M1_scaffold_183_102
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124029..125297
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FTW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17978.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Putative peptidoglycan-binding domain-containing protein
L1_008_000M1_scaffold_183_103
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

125357..125569
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BEV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17976.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_104
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125671..126708)
DNA (1038bp) protein (346aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Putative RIP metalloprotease RseP n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1F5_9FIRM
RIP metalloprotease RseP
L1_008_000M1_scaffold_183_105
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126717..127859)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEV7_9FIRM
L1_008_000M1_scaffold_183_106
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127869..128675)
DNA (807bp) protein (269aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=2 Tax=Dorea RepID=A6BEV8_9FIRM
L1_008_000M1_scaffold_183_107
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128668..129390)
DNA (723bp) protein (241aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEV9_9FIRM
L1_008_000M1_scaffold_183_108
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(129503..130054)
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=2 Tax=Dorea RepID=A6BEW0_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribosome recycling factor
L1_008_000M1_scaffold_183_109
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130089..130784)
DNA (696bp) protein (232aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Dorea RepID=A6BEW1_9FIRM
L1_008_000M1_scaffold_183_110
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130914..131492)
DNA (579bp) protein (193aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=2 Tax=Dorea RepID=A6BEW2_9FIRM
L1_008_000M1_scaffold_183_111
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(131592..133880)
DNA (2289bp) protein (763aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEW3_9FIRM
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EDM64152.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_183_112
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(133877..134344)
DNA (468bp) protein (156aa)
2Fe-2S iron-sulfur cluster-binding domain protein n=2 Tax=Dorea RepID=A6BEW4_9FIRM
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:CDE21256.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
L1_008_000M1_scaffold_183_113
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134348..135160)
DNA (813bp) protein (271aa)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2B3_9FIRM
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:CDE21255.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L1_008_000M1_scaffold_183_114
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135236..135664)
DNA (429bp) protein (143aa)
4Fe-4S binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEW6_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDM64155.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
4Fe-4S ferredoxin
L1_008_000M1_scaffold_183_115
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135661..137652)
DNA (1992bp) protein (664aa)
Molybdopterin oxidoreductase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3H8_9FIRM
Molybdopterin oxidoreductase {ECO:0000313|EMBL:CDE21253.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
formate dehydrogenase
L1_008_000M1_scaffold_183_116
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137809..139155)
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEW8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM64157.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_183_117
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139305..139883)
DNA (579bp) protein (193aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Dorea longicatena CAG:42 RepID=R7G5H3_9FIRM
L1_008_000M1_scaffold_183_118
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139979..140611)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21246.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_119
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

141167..141694
DNA (528bp) protein (176aa)
Protein ThiW n=2 Tax=Dorea RepID=R7G2A3_9FIRM
Protein ThiW {ECO:0000313|EMBL:CDE21245.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
thiW protein
L1_008_000M1_scaffold_183_120
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

141902..143212
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Phosphomethylpyrimidine synthase n=2 Tax=Dorea RepID=A6BEX3_9FIRM
hydroxymethylpyrimidine synthase
Displaying items 91-120 of 168 in total

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