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L1_008_000M1_scaffold_183

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Displaying items 61-90 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_183_61
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(71629..73302)
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ8_9FIRM
L1_008_000M1_scaffold_183_62
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(73383..74468)
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEJ9_9FIRM
L1_008_000M1_scaffold_183_63
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74565..74753)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64039.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_183_64
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74854..75594)
DNA (741bp) protein (247aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Dorea RepID=R7FWD6_9FIRM
pyruvate formate-lyase activating enzyme
L1_008_000M1_scaffold_183_65
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75775..78027)
DNA (2253bp) protein (751aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDM64042.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDM64042.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEK3_9FIRM
L1_008_000M1_scaffold_183_66
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78331..78639)
DNA (309bp) protein (103aa)
Preprotein translocase, YajC subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEK4_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDM64043.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
preprotein translocase, YajC subunit
L1_008_000M1_scaffold_183_67
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78730..79863)
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Dorea RepID=A6BEK5_9FIRM
L1_008_000M1_scaffold_183_68
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79883..81442)
DNA (1560bp) protein (520aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEK6_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDM64045.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L1_008_000M1_scaffold_183_69
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81668..82765
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Dorea RepID=A6BEK7_9FIRM
L1_008_000M1_scaffold_183_70
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82901..84568)
DNA (1668bp) protein (556aa)
Uridine kinase (EC:2.7.1.48)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FU17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18023.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_71
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84608..85402)
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Dorea RepID=A6BEL0_9FIRM
conserved hypothetical protein TIGR00486
L1_008_000M1_scaffold_183_72
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85422..86117)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64050.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted SAM-dependent methyltransferase
L1_008_000M1_scaffold_183_73
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86132..87241)
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=2 Tax=Dorea RepID=A6BEL2_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
RNA polymerase, sigma 70 subunit, RpoD
L1_008_000M1_scaffold_183_74
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87281..89059)
DNA (1779bp) protein (593aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEL3_9FIRM
L1_008_000M1_scaffold_183_75
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89543..90088)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18016.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_76
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90048..91805)
DNA (1758bp) protein (586aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Putative glycogen debranching enzyme GlgX n=1 Tax=Dorea longicatena CAG:42 RepID=R7FT43_9FIRM
Putative glycogen debranching enzyme GlgX {ECO:0000313|EMBL:CDE18015.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_183_77
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(91835..92854)
DNA (1020bp) protein (340aa)
Sugar-binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEL6_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDM64056.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_008_000M1_scaffold_183_78
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92997..93308
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BEL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64055.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Protein of unknown function (DUF1292).
L1_008_000M1_scaffold_183_79
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93291..95132)
DNA (1842bp) protein (614aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWB4_9FIRM
L1_008_000M1_scaffold_183_80
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(95142..96605)
DNA (1464bp) protein (488aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Dorea RepID=A6BEL9_9FIRM
L1_008_000M1_scaffold_183_81
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96732..97208)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18010.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_82
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97208..98368)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BEM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18008.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_183_83
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98493..99350)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64061.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_183_84
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99480..100913)
DNA (1434bp) protein (478aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=2 Tax=Dorea RepID=A6BEM3_9FIRM
L1_008_000M1_scaffold_183_85
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100965..102392)
DNA (1428bp) protein (476aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEM4_9FIRM
L1_008_000M1_scaffold_183_86
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102617..103300)
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=2 Tax=Dorea RepID=A6BEM6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE18003.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
amino acid ABC transporter ATP-binding protein
L1_008_000M1_scaffold_183_87
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103313..103963)
DNA (651bp) protein (217aa)
ABC transporter, permease protein n=2 Tax=Dorea RepID=A6BEM7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDE18002.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L1_008_000M1_scaffold_183_88
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104034..104891)
DNA (858bp) protein (286aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEM8_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EDM64067.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
amino acid ABC transporter substrate-binding protein
L1_008_000M1_scaffold_183_89
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104999..105778)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BEM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM64068.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_183_90
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105753..107036)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BEN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17997.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
Displaying items 61-90 of 168 in total

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