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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_2951 174_005_scaffold_2951
Species: Clostridium sartagoforme (50%)
2 1669 bp 26.36 6.56 82.50
NECEvent2014_4_5_scaffold_2401 174_005_scaffold_2401
Species: Clostridium celatum (66.67%)
3 2284 bp 23.99 6.57 75.53
NECEvent2014_4_5_scaffold_1730 174_005_scaffold_1730
Species: Clostridium chauvoei (50%)
4 3610 bp 25.76 6.57 79.45
NECEvent2014_4_5_scaffold_3014 174_005_scaffold_3014
Species: Clostridium sartagoforme (50%)
4 1609 bp 26.41 6.62 86.14
NECEvent2014_4_5_scaffold_2327 174_005_scaffold_2327
Genus: Clostridium (66.67%)
3 2374 bp 26.12 6.63 73.04
NECEvent2014_4_5_scaffold_2121 174_005_scaffold_2121
Genus: Clostridium (80%)
5 2694 bp 26.43 6.63 56.79
NECEvent2014_4_5_scaffold_1807 174_005_scaffold_1807
Species: Clostridium sp. 7_2_43FAA (50%)
2 3394 bp 25.07 6.72 84.06
NECEvent2014_4_5_scaffold_1930 174_005_scaffold_1930
Genus: Clostridium (60%)
5 3067 bp 25.63 6.75 98.21
NECEvent2014_4_5_scaffold_962 174_005_scaffold_962
Species: Clostridium sp. 7_2_43FAA (77.78%)
9 8062 bp 27.36 6.75 82.91
NECEvent2014_4_5_scaffold_1441 174_005_scaffold_1441
Genus: Clostridium (100%)
7 4622 bp 27.02 6.78 84.51
NECEvent2014_4_5_scaffold_1398 174_005_scaffold_1398
Species: Clostridium sp. 7_2_43FAA (80%)
5 4820 bp 27.80 6.82 82.34
NECEvent2014_4_5_scaffold_1211 174_005_scaffold_1211
Genus: Clostridium (55.56%)
9 5842 bp 26.72 6.88 74.51
NECEvent2014_4_5_scaffold_1636 174_005_scaffold_1636
Species: Clostridium sp. 7_2_43FAA (50%)
6 3890 bp 25.01 6.94 78.28
NECEvent2014_4_5_scaffold_4036 174_005_scaffold_4036
Species: Clostridium sp. 7_2_43FAA (100%)
1 1079 bp 26.60 6.95 96.20
NECEvent2014_4_5_scaffold_1283 174_005_scaffold_1283
Species: Clostridium sp. 7_2_43FAA (100%)
6 5424 bp 26.51 6.97 92.42
NECEvent2014_4_5_scaffold_1019 174_005_scaffold_1019
Species: Clostridium sp. 7_2_43FAA (87.5%)
8 7468 bp 25.25 6.99 95.17
NECEvent2014_4_5_scaffold_4064 174_005_scaffold_4064
Species: Clostridium sp. DL-VIII (100%)
1 1071 bp 26.80 7.00 81.23
NECEvent2014_4_5_scaffold_1590 174_005_scaffold_1590
Species: Clostridium sartagoforme (50%)
4 4025 bp 27.18 7.01 82.14
NECEvent2014_4_5_scaffold_2701 174_005_scaffold_2701
Species: Clostridium sp. 7_2_43FAA (100%)
1 1904 bp 23.63 7.01 94.70
NECEvent2014_4_5_scaffold_3334 174_005_scaffold_3334
Species: Clostridium sp. 7_2_43FAA (100%)
2 1410 bp 25.82 7.02 78.30
NECEvent2014_4_5_scaffold_3842 174_005_scaffold_3842
Species: Clostridium sartagoforme (50%)
2 1152 bp 29.17 7.03 84.55
NECEvent2014_4_5_scaffold_2003 174_005_scaffold_2003
Genus: Clostridium (100%)
5 2901 bp 24.34 7.03 81.90
NECEvent2014_4_5_scaffold_3126 174_005_scaffold_3126
Species: Clostridium sp. 7_2_43FAA (50%)
2 1530 bp 26.54 7.06 70.98
NECEvent2014_4_5_scaffold_1372 174_005_scaffold_1372
Genus: Clostridium (60%)
5 4931 bp 26.87 7.06 81.40
NECEvent2014_4_5_scaffold_4030 174_005_scaffold_4030
Species: Clostridium sp. 7_2_43FAA (50%)
2 1083 bp 26.32 7.06 83.93
NECEvent2014_4_5_scaffold_2366 174_005_scaffold_2366
Species: Clostridium sp. CAG:417 (50%)
2 2330 bp 27.42 7.08 96.82
NECEvent2014_4_5_scaffold_1429 174_005_scaffold_1429
Species: Clostridium sp. 7_2_43FAA (75%)
4 4691 bp 25.88 7.10 90.75
NECEvent2014_4_5_scaffold_3993 174_005_scaffold_3993
Species: Clostridium sartagoforme (100%)
1 1095 bp 29.59 7.12 65.21
NECEvent2014_4_5_scaffold_2772 174_005_scaffold_2772
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 1832 bp 28.66 7.12 91.38
NECEvent2014_4_5_scaffold_2473 174_005_scaffold_2473
Species: Clostridium sartagoforme (60%)
5 2183 bp 27.44 7.21 98.12
NECEvent2014_4_5_scaffold_999 174_005_scaffold_999
Species: Clostridium sp. 7_2_43FAA (66.67%)
9 7674 bp 26.17 7.23 93.32
NECEvent2014_4_5_scaffold_2522 174_005_scaffold_2522
Genus: Clostridium (66.67%)
3 2114 bp 28.15 7.24 77.63
NECEvent2014_4_5_scaffold_1583 174_005_scaffold_1583
Species: Clostridium sp. 7_2_43FAA (60%)
5 4052 bp 25.37 7.26 87.44
NECEvent2014_4_5_scaffold_1499 174_005_scaffold_1499
Species: Clostridium saccharobutylicum (50%)
4 4405 bp 26.54 7.29 84.38
NECEvent2014_4_5_scaffold_2084 174_005_scaffold_2084
Species: Clostridium sp. 7_2_43FAA (100%)
2 2750 bp 28.00 7.31 90.11
NECEvent2014_4_5_scaffold_1229 174_005_scaffold_1229
Species: Clostridium sp. 7_2_43FAA (80%)
5 5713 bp 25.54 7.33 87.43
NECEvent2014_4_5_scaffold_1340 174_005_scaffold_1340
Species: Clostridium sp. 7_2_43FAA (87.5%)
8 5102 bp 25.66 7.35 82.09
NECEvent2014_4_5_scaffold_2802 174_005_scaffold_2802
Genus: Clostridium (66.67%)
3 1811 bp 25.23 7.37 65.76
NECEvent2014_4_5_scaffold_1199 174_005_scaffold_1199
Species: Clostridium sp. 7_2_43FAA (75%)
4 5907 bp 26.92 7.39 79.33
NECEvent2014_4_5_scaffold_2845 174_005_scaffold_2845
Species: Clostridium sp. 7_2_43FAA (100%)
3 1777 bp 25.38 7.43 90.83
NECEvent2014_4_5_scaffold_1420 174_005_scaffold_1420
Species: Clostridium sp. 7_2_43FAA (75%)
4 4725 bp 26.81 7.43 92.25
NECEvent2014_4_5_scaffold_1777 174_005_scaffold_1777
Genus: Clostridium (57.14%)
7 3471 bp 28.35 7.43 68.94
NECEvent2014_4_5_scaffold_1277 174_005_scaffold_1277
Species: Clostridium sp. 7_2_43FAA (71.43%)
7 5445 bp 25.09 7.44 95.21
NECEvent2014_4_5_scaffold_2002 174_005_scaffold_2002
Species: Clostridium sp. 7_2_43FAA (75%)
4 2903 bp 26.87 7.44 72.34
NECEvent2014_4_5_scaffold_3241 174_005_scaffold_3241
Species: Clostridium botulinum (100%)
1 1470 bp 26.94 7.45 60.41
NECEvent2014_4_5_scaffold_1391 174_005_scaffold_1391
Species: Clostridium sp. 7_2_43FAA (66.67%)
6 4856 bp 26.94 7.48 80.87
NECEvent2014_4_5_scaffold_3874 174_005_scaffold_3874 5 1140 bp 34.56 7.50 71.32
NECEvent2014_4_5_scaffold_2157 174_005_scaffold_2157
Genus: Clostridium (100%)
5 2639 bp 28.23 7.50 79.80
NECEvent2014_4_5_scaffold_2687 174_005_scaffold_2687
Species: Clostridium sp. 7_2_43FAA (100%)
2 1918 bp 27.22 7.51 88.37
NECEvent2014_4_5_scaffold_1444 174_005_scaffold_1444
Genus: Clostridium (60%)
5 4616 bp 25.63 7.51 78.96
Displaying items 51-100 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.