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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1190 174_005_scaffold_1190
Genus: Clostridium (88.89%)
9 5954 bp 28.08 8.16 81.93
NECEvent2014_4_5_scaffold_2935 174_005_scaffold_2935
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 1689 bp 28.42 8.17 98.40
NECEvent2014_4_5_scaffold_1288 174_005_scaffold_1288
Species: Clostridium sp. 7_2_43FAA (60%)
5 5385 bp 27.13 8.19 83.40
NECEvent2014_4_5_scaffold_1094 174_005_scaffold_1094
Genus: Clostridium (100%)
7 6724 bp 26.98 8.19 88.34
NECEvent2014_4_5_scaffold_1722 174_005_scaffold_1722
Species: Clostridium sp. 7_2_43FAA (100%)
3 3641 bp 26.31 8.20 89.32
NECEvent2014_4_5_scaffold_1989 174_005_scaffold_1989
Species: Clostridium sp. 7_2_43FAA (100%)
4 2927 bp 27.02 8.20 81.59
NECEvent2014_4_5_scaffold_1113 174_005_scaffold_1113
Species: Clostridium sp. 7_2_43FAA (80%)
5 6525 bp 27.83 8.21 81.84
NECEvent2014_4_5_scaffold_3659 174_005_scaffold_3659
Species: Clostridium sp. 7_2_43FAA (50%)
2 1240 bp 25.65 8.23 91.21
NECEvent2014_4_5_scaffold_1118 174_005_scaffold_1118
Species: Clostridium sp. 7_2_43FAA (83.33%)
6 6459 bp 27.25 8.24 85.56
NECEvent2014_4_5_scaffold_553 174_005_scaffold_553
Species: Clostridium sp. 7_2_43FAA (76.92%)
13 13945 bp 26.89 8.25 89.45
NECEvent2014_4_5_scaffold_306 174_005_scaffold_306
Genus: Clostridium (73.91%)
23 22958 bp 28.38 8.26 87.69
NECEvent2014_4_5_scaffold_480 174_005_scaffold_480
Genus: Clostridium (64.29%)
14 15919 bp 28.07 8.27 80.60
NECEvent2014_4_5_scaffold_847 174_005_scaffold_847
Species: Clostridium sp. 7_2_43FAA (87.5%)
8 9334 bp 27.01 8.28 87.94
NECEvent2014_4_5_scaffold_417 174_005_scaffold_417
Species: Clostridium sp. 7_2_43FAA (64.29%)
14 18216 bp 28.69 8.29 91.67
NECEvent2014_4_5_scaffold_556 174_005_scaffold_556
Species: Clostridium sp. 7_2_43FAA (81.82%)
11 13911 bp 27.50 8.31 93.75
NECEvent2014_4_5_scaffold_662 174_005_scaffold_662
Species: Clostridium sp. 7_2_43FAA (61.54%)
13 11924 bp 29.21 8.32 79.91
NECEvent2014_4_5_scaffold_2785 174_005_scaffold_2785
Species: Clostridium sartagoforme (50%)
2 1822 bp 27.66 8.32 15.15
NECEvent2014_4_5_scaffold_563 174_005_scaffold_563
Species: Clostridium sp. 7_2_43FAA (63.64%)
11 13799 bp 27.03 8.33 89.57
NECEvent2014_4_5_scaffold_603 174_005_scaffold_603
Species: Clostridium sp. 7_2_43FAA (75%)
12 13024 bp 27.18 8.33 84.14
NECEvent2014_4_5_scaffold_1362 174_005_scaffold_1362
Species: Clostridium sp. 7_2_43FAA (85.71%)
7 4981 bp 27.00 8.37 93.48
NECEvent2014_4_5_scaffold_2260 174_005_scaffold_2260
Species: Clostridium sp. 7_2_43FAA (60%)
5 2474 bp 28.09 8.37 99.07
NECEvent2014_4_5_scaffold_2553 174_005_scaffold_2553
Species: Clostridium sp. 7_2_43FAA (100%)
3 2076 bp 25.87 8.38 92.49
NECEvent2014_4_5_scaffold_2643 174_005_scaffold_2643
Species: Lachnospiraceae bacterium 3_1_57FAA_CT1 (50%)
2 1968 bp 30.59 8.38 94.66
NECEvent2014_4_5_scaffold_1043 174_005_scaffold_1043
Species: Clostridium sp. 7_2_43FAA (77.78%)
9 7221 bp 26.80 8.39 86.12
NECEvent2014_4_5_scaffold_3067 174_005_scaffold_3067
Species: Clostridium sp. 7_2_43FAA (100%)
1 1572 bp 30.34 8.40 95.80
NECEvent2014_4_5_scaffold_641 174_005_scaffold_641
Species: Clostridium sp. 7_2_43FAA (61.54%)
13 12303 bp 27.12 8.40 84.17
NECEvent2014_4_5_scaffold_3161 174_005_scaffold_3161
Species: Clostridium sartagoforme (100%)
1 1510 bp 30.00 8.44 86.42
NECEvent2014_4_5_scaffold_1156 174_005_scaffold_1156
Species: Clostridium sp. 7_2_43FAA (80%)
5 6162 bp 28.45 8.45 82.08
NECEvent2014_4_5_scaffold_729 174_005_scaffold_729
Species: Clostridium sartagoforme (55.56%)
9 10915 bp 29.71 8.45 85.73
NECEvent2014_4_5_scaffold_1108 174_005_scaffold_1108
Genus: Clostridium (75%)
4 6569 bp 29.21 8.49 79.42
NECEvent2014_4_5_scaffold_738 174_005_scaffold_738
Genus: Clostridium (100%)
10 10760 bp 28.64 8.49 81.83
NECEvent2014_4_5_scaffold_810 174_005_scaffold_810
Genus: Clostridium (88.89%)
9 9806 bp 27.98 8.50 84.81
NECEvent2014_4_5_scaffold_3626 174_005_scaffold_3626
Species: Clostridium sp. 7_2_43FAA (100%)
1 1253 bp 24.34 8.50 62.01
NECEvent2014_4_5_scaffold_2983 174_005_scaffold_2983
Species: Clostridium sp. 7_2_43FAA (100%)
1 1641 bp 30.16 8.50 90.68
NECEvent2014_4_5_scaffold_1830 174_005_scaffold_1830
Species: Clostridium sp. 7_2_43FAA (60%)
5 3342 bp 27.95 8.53 86.71
NECEvent2014_4_5_scaffold_2111 174_005_scaffold_2111
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2709 bp 28.94 8.53 87.49
NECEvent2014_4_5_scaffold_635 174_005_scaffold_635
Order: Clostridiales (75%)
8 12425 bp 26.50 8.54 84.77
NECEvent2014_4_5_scaffold_1582 174_005_scaffold_1582 8 4053 bp 29.56 8.55 85.29
NECEvent2014_4_5_scaffold_696 174_005_scaffold_696
Genus: Clostridium (87.5%)
8 11338 bp 27.09 8.55 84.94
NECEvent2014_4_5_scaffold_783 174_005_scaffold_783
Species: Clostridium sp. 7_2_43FAA (90%)
10 10164 bp 28.91 8.56 88.08
NECEvent2014_4_5_scaffold_467 174_005_scaffold_467
Species: Clostridium sp. 7_2_43FAA (75%)
16 16266 bp 28.96 8.59 88.51
NECEvent2014_4_5_scaffold_597 174_005_scaffold_597
Species: Clostridium sp. 7_2_43FAA (75%)
12 13136 bp 28.00 8.61 93.04
NECEvent2014_4_5_scaffold_2164 174_005_scaffold_2164
Species: Clostridium sp. 7_2_43FAA (50%)
4 2631 bp 25.58 8.61 76.97
NECEvent2014_4_5_scaffold_2044 174_005_scaffold_2044
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2815 bp 28.95 8.63 70.44
NECEvent2014_4_5_scaffold_1659 174_005_scaffold_1659
Species: Clostridium sartagoforme (50%)
2 3845 bp 29.26 8.66 90.20
NECEvent2014_4_5_scaffold_2332 174_005_scaffold_2332
Genus: Clostridium (100%)
3 2370 bp 28.90 8.67 72.41
NECEvent2014_4_5_scaffold_322 174_005_scaffold_322
Order: Clostridiales (88.24%)
17 22009 bp 29.23 8.68 86.77
NECEvent2014_4_5_scaffold_1415 174_005_scaffold_1415
Species: Clostridium sp. 7_2_43FAA (75%)
4 4737 bp 28.82 8.68 92.65
NECEvent2014_4_5_scaffold_773 174_005_scaffold_773
Genus: Clostridium (66.67%)
9 10278 bp 27.73 8.70 80.68
NECEvent2014_4_5_scaffold_1305 174_005_scaffold_1305
Genus: Clostridium (60%)
5 5294 bp 26.46 8.70 95.20
Displaying items 151-200 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.