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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1374 174_005_scaffold_1374
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 4927 bp 25.82 7.52 95.47
NECEvent2014_4_5_scaffold_2709 174_005_scaffold_2709
Species: Clostridium sp. 7_2_43FAA (100%)
2 1894 bp 28.35 7.52 95.04
NECEvent2014_4_5_scaffold_1714 174_005_scaffold_1714
Species: Clostridium sp. 7_2_43FAA (75%)
4 3671 bp 27.79 7.56 93.90
NECEvent2014_4_5_scaffold_775 174_005_scaffold_775
Genus: Clostridium (77.78%)
9 10221 bp 27.19 7.57 87.32
NECEvent2014_4_5_scaffold_3952 174_005_scaffold_3952
Species: Clostridium sartagoforme (50%)
2 1109 bp 31.11 7.57 99.55
NECEvent2014_4_5_scaffold_1686 174_005_scaffold_1686
Genus: Clostridium (100%)
5 3767 bp 26.68 7.57 92.94
NECEvent2014_4_5_scaffold_1207 174_005_scaffold_1207
Species: Clostridium sp. 7_2_43FAA (80%)
5 5881 bp 25.59 7.58 74.32
NECEvent2014_4_5_scaffold_2246 174_005_scaffold_2246
Species: Clostridium sp. 7_2_43FAA (100%)
3 2495 bp 29.50 7.58 82.61
NECEvent2014_4_5_scaffold_2102 174_005_scaffold_2102
Species: Clostridium sartagoforme (50%)
4 2721 bp 28.70 7.61 87.98
NECEvent2014_4_5_scaffold_2570 174_005_scaffold_2570
Genus: Clostridium (80%)
5 2047 bp 27.60 7.62 76.36
NECEvent2014_4_5_scaffold_1124 174_005_scaffold_1124
Genus: Clostridium (70%)
10 6439 bp 26.99 7.62 88.34
NECEvent2014_4_5_scaffold_940 174_005_scaffold_940
Species: Clostridium sp. 7_2_43FAA (71.43%)
7 8283 bp 26.38 7.66 82.87
NECEvent2014_4_5_scaffold_3309 174_005_scaffold_3309
Species: Clostridium colicanis (100%)
1 1427 bp 26.70 7.67 90.61
NECEvent2014_4_5_scaffold_2114 174_005_scaffold_2114
Species: Clostridium sp. 7_2_43FAA (100%)
2 2705 bp 28.95 7.71 85.29
NECEvent2014_4_5_scaffold_3146 174_005_scaffold_3146
Species: Clostridium sp. 7_2_43FAA (50%)
2 1518 bp 26.94 7.71 90.51
NECEvent2014_4_5_scaffold_1467 174_005_scaffold_1467
Species: Clostridium sp. 7_2_43FAA (80%)
5 4534 bp 26.75 7.71 96.80
NECEvent2014_4_5_scaffold_1024 174_005_scaffold_1024
Species: Clostridium sp. 7_2_43FAA (100%)
5 7414 bp 27.06 7.73 92.14
NECEvent2014_4_5_scaffold_2590 174_005_scaffold_2590
Species: Clostridium sp. 7_2_43FAA (100%)
2 2018 bp 28.69 7.73 79.24
NECEvent2014_4_5_scaffold_470 174_005_scaffold_470
Genus: Clostridium (75%)
16 16193 bp 26.04 7.73 80.53
NECEvent2014_4_5_scaffold_1576 174_005_scaffold_1576
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 4087 bp 29.92 7.74 77.07
NECEvent2014_4_5_scaffold_1335 174_005_scaffold_1335
Species: Clostridium sp. 7_2_43FAA (100%)
7 5119 bp 27.02 7.74 86.27
NECEvent2014_4_5_scaffold_1602 174_005_scaffold_1602
Species: Clostridium sp. 7_2_43FAA (100%)
4 4004 bp 27.95 7.75 87.89
NECEvent2014_4_5_scaffold_3239 174_005_scaffold_3239
Species: Clostridium sartagoforme (50%)
2 1471 bp 25.63 7.75 78.93
NECEvent2014_4_5_scaffold_1331 174_005_scaffold_1331
Species: Clostridium sartagoforme (66.67%)
6 5133 bp 27.12 7.77 86.32
NECEvent2014_4_5_scaffold_1258 174_005_scaffold_1258
Species: Clostridium sp. 7_2_43FAA (60%)
5 5565 bp 28.54 7.79 85.66
NECEvent2014_4_5_scaffold_1039 174_005_scaffold_1039
Species: Clostridium sp. 7_2_43FAA (100%)
7 7257 bp 27.33 7.81 69.53
NECEvent2014_4_5_scaffold_2883 174_005_scaffold_2883
Species: Clostridium sp. 7_2_43FAA (50%)
2 1745 bp 31.40 7.82 77.54
NECEvent2014_4_5_scaffold_2043 174_005_scaffold_2043
Species: Clostridium sp. 7_2_43FAA (50%)
4 2816 bp 27.41 7.83 90.13
NECEvent2014_4_5_scaffold_1666 174_005_scaffold_1666
Genus: Clostridium (75%)
4 3827 bp 27.52 7.84 88.42
NECEvent2014_4_5_scaffold_1408 174_005_scaffold_1408
Species: Clostridium sp. 7_2_43FAA (83.33%)
6 4777 bp 27.99 7.85 79.44
NECEvent2014_4_5_scaffold_546 174_005_scaffold_546
Species: Clostridium sp. 7_2_43FAA (76.92%)
13 14180 bp 27.07 7.86 84.65
NECEvent2014_4_5_scaffold_1173 174_005_scaffold_1173
Genus: Clostridium (100%)
7 6067 bp 25.32 7.86 62.50
NECEvent2014_4_5_scaffold_998 174_005_scaffold_998
Species: Clostridium sp. 7_2_43FAA (100%)
7 7695 bp 26.89 7.89 92.63
NECEvent2014_4_5_scaffold_1571 174_005_scaffold_1571
Species: Clostridium sp. 7_2_43FAA (75%)
4 4103 bp 27.20 7.90 82.55
NECEvent2014_4_5_scaffold_1322 174_005_scaffold_1322
Species: Clostridium sp. 7_2_43FAA (57.14%)
7 5156 bp 25.54 7.91 91.06
NECEvent2014_4_5_scaffold_972 174_005_scaffold_972
Genus: Clostridium (77.78%)
9 7952 bp 26.80 7.92 72.32
NECEvent2014_4_5_scaffold_755 174_005_scaffold_755
Species: Clostridium sp. 7_2_43FAA (50%)
8 10572 bp 26.61 7.92 90.58
NECEvent2014_4_5_scaffold_1358 174_005_scaffold_1358
Genus: Clostridium (50%)
8 5001 bp 27.19 7.98 74.69
NECEvent2014_4_5_scaffold_2056 174_005_scaffold_2056
Species: Clostridium sp. 7_2_43FAA (100%)
3 2797 bp 27.28 7.99 70.36
NECEvent2014_4_5_scaffold_1009 174_005_scaffold_1009
Order: Clostridiales (75%)
8 7582 bp 27.54 8.01 89.98
NECEvent2014_4_5_scaffold_400 174_005_scaffold_400
Genus: Clostridium (83.33%)
18 18854 bp 27.50 8.04 82.22
NECEvent2014_4_5_scaffold_627 174_005_scaffold_627
Species: Clostridium sp. 7_2_43FAA (90.91%)
11 12510 bp 26.57 8.06 91.08
NECEvent2014_4_5_scaffold_897 174_005_scaffold_897
Genus: Clostridium (100%)
7 8722 bp 27.32 8.07 89.70
NECEvent2014_4_5_scaffold_2051 174_005_scaffold_2051
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2802 bp 26.27 8.08 88.54
NECEvent2014_4_5_scaffold_737 174_005_scaffold_737
Genus: Clostridium (63.64%)
11 10767 bp 27.65 8.08 74.00
NECEvent2014_4_5_scaffold_2289 174_005_scaffold_2289
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2429 bp 28.45 8.09 84.23
NECEvent2014_4_5_scaffold_695 174_005_scaffold_695
Species: Clostridium sp. 7_2_43FAA (80%)
10 11353 bp 27.26 8.11 86.86
NECEvent2014_4_5_scaffold_3699 174_005_scaffold_3699
Species: Clostridium sartagoforme (50%)
2 1218 bp 26.27 8.13 86.95
NECEvent2014_4_5_scaffold_3162 174_005_scaffold_3162
Species: Clostridium sp. 7_2_43FAA (100%)
2 1510 bp 29.27 8.15 89.21
NECEvent2014_4_5_scaffold_2090 174_005_scaffold_2090
Species: Clostridium sp. 7_2_43FAA (50%)
2 2740 bp 28.47 8.16 89.34
Displaying items 101-150 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.