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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 601-650 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_3668 178_001_scaffold_3668
Species: Clostridium perfringens (100%)
1 1269 bp 31.84 6.38 99.76
NECEvent2014_8_1_scaffold_3669 178_001_scaffold_3669
Species: Clostridium perfringens (100%)
1 1269 bp 27.11 3.78 99.76
NECEvent2014_8_1_scaffold_2781 178_001_scaffold_2781
Species: Clostridium perfringens (100%)
1 1699 bp 30.14 6.18 99.76
NECEvent2014_8_1_scaffold_3427 178_001_scaffold_3427
Species: Clostridium perfringens (100%)
2 1365 bp 28.72 7.03 99.78
NECEvent2014_8_1_scaffold_3350 178_001_scaffold_3350
Species: Clostridium perfringens (100%)
1 1398 bp 32.05 6.65 99.79
NECEvent2014_8_1_scaffold_2511 178_001_scaffold_2511
Species: Clostridium perfringens (100%)
1 1876 bp 30.12 7.36 99.79
NECEvent2014_8_1_scaffold_3229 178_001_scaffold_3229
Species: Clostridium perfringens (100%)
1 1449 bp 34.16 15.32 99.79
NECEvent2014_8_1_scaffold_3194 178_001_scaffold_3194
Species: Clostridium perfringens (100%)
2 1461 bp 31.83 8.11 99.79
NECEvent2014_8_1_scaffold_3107 178_001_scaffold_3107
Species: Clostridium perfringens (100%)
1 1509 bp 31.81 9.15 99.80
NECEvent2014_8_1_scaffold_2307 178_001_scaffold_2307
Species: Clostridium perfringens (100%)
1 2038 bp 31.84 9.49 99.80
NECEvent2014_8_1_scaffold_4529 178_001_scaffold_4529
Species: Clostridium perfringens (100%)
1 1022 bp 31.41 6.46 99.80
NECEvent2014_8_1_scaffold_4393 178_001_scaffold_4393
Species: Clostridium perfringens (100%)
1 1055 bp 29.76 6.26 99.81
NECEvent2014_8_1_scaffold_4381 178_001_scaffold_4381
Species: Clostridium perfringens (100%)
1 1058 bp 31.76 9.07 99.81
NECEvent2014_8_1_scaffold_4370 178_001_scaffold_4370
Species: Clostridium perfringens (100%)
1 1061 bp 32.23 5.37 99.81
NECEvent2014_8_1_scaffold_4360 178_001_scaffold_4360
Species: Clostridium perfringens (100%)
1 1064 bp 32.99 6.77 99.81
NECEvent2014_8_1_scaffold_4361 178_001_scaffold_4361
Species: Clostridium perfringens (100%)
1 1064 bp 30.64 8.18 99.81
NECEvent2014_8_1_scaffold_4318 178_001_scaffold_4318
Species: Clostridium perfringens (100%)
1 1073 bp 30.20 6.99 99.81
NECEvent2014_8_1_scaffold_4308 178_001_scaffold_4308
Species: Clostridium perfringens (100%)
1 1076 bp 29.74 9.48 99.81
NECEvent2014_8_1_scaffold_4240 178_001_scaffold_4240
Species: Clostridium perfringens (100%)
1 1094 bp 30.80 7.13 99.82
NECEvent2014_8_1_scaffold_4232 178_001_scaffold_4232
Species: Clostridium perfringens (100%)
1 1097 bp 30.54 4.92 99.82
NECEvent2014_8_1_scaffold_4184 178_001_scaffold_4184
Species: Clostridium perfringens (100%)
1 1109 bp 31.92 5.41 99.82
NECEvent2014_8_1_scaffold_4185 178_001_scaffold_4185
Species: Clostridium perfringens (100%)
1 1109 bp 32.64 12.98 99.82
NECEvent2014_8_1_scaffold_4110 178_001_scaffold_4110
Species: Clostridium perfringens (100%)
1 1130 bp 30.97 5.58 99.82
NECEvent2014_8_1_scaffold_4068 178_001_scaffold_4068
Species: Clostridium perfringens (100%)
1 1142 bp 29.77 8.41 99.82
NECEvent2014_8_1_scaffold_4073 178_001_scaffold_4073
Species: Clostridium perfringens (100%)
1 1142 bp 27.85 4.20 99.82
NECEvent2014_8_1_scaffold_3977 178_001_scaffold_3977
Species: Clostridium perfringens (100%)
1 1166 bp 28.82 3.60 99.83
NECEvent2014_8_1_scaffold_3948 178_001_scaffold_3948
Species: Clostridium perfringens (100%)
1 1175 bp 31.83 10.21 99.83
NECEvent2014_8_1_scaffold_3929 178_001_scaffold_3929
Species: Clostridium perfringens (100%)
1 1181 bp 29.38 4.06 99.83
NECEvent2014_8_1_scaffold_2624 178_001_scaffold_2624
Species: Clostridium perfringens (100%)
1 1794 bp 33.44 7.19 99.83
NECEvent2014_8_1_scaffold_3846 178_001_scaffold_3846
Species: Clostridium perfringens (100%)
1 1208 bp 28.15 4.97 99.83
NECEvent2014_8_1_scaffold_2597 178_001_scaffold_2597
Species: Clostridium perfringens (100%)
1 1815 bp 30.30 6.61 99.83
NECEvent2014_8_1_scaffold_3822 178_001_scaffold_3822
Species: Clostridium perfringens (100%)
2 1214 bp 31.38 5.93 99.84
NECEvent2014_8_1_scaffold_2551 178_001_scaffold_2551
Species: Clostridium perfringens (100%)
1 1845 bp 31.71 11.54 99.84
NECEvent2014_8_1_scaffold_3673 178_001_scaffold_3673
Species: Clostridium perfringens (100%)
1 1268 bp 33.04 13.96 99.84
NECEvent2014_8_1_scaffold_2474 178_001_scaffold_2474
Species: Clostridium perfringens (100%)
1 1902 bp 31.23 8.83 99.84
NECEvent2014_8_1_scaffold_3626 178_001_scaffold_3626
Species: Clostridium perfringens (100%)
1 1283 bp 29.85 4.44 99.84
NECEvent2014_8_1_scaffold_3601 178_001_scaffold_3601
Species: Clostridium perfringens (100%)
1 1292 bp 30.19 9.98 99.85
NECEvent2014_8_1_scaffold_2321 178_001_scaffold_2321
Species: Clostridium perfringens (100%)
1 2025 bp 31.90 7.41 99.85
NECEvent2014_8_1_scaffold_3422 178_001_scaffold_3422
Species: Clostridium perfringens (100%)
1 1367 bp 29.85 7.46 99.85
NECEvent2014_8_1_scaffold_3373 178_001_scaffold_3373
Species: Clostridium perfringens (100%)
1 1388 bp 27.67 9.73 99.86
NECEvent2014_8_1_scaffold_3336 178_001_scaffold_3336
Species: Clostridium perfringens (100%)
1 1403 bp 29.08 4.92 99.86
NECEvent2014_8_1_scaffold_3337 178_001_scaffold_3337
Species: Clostridium perfringens (100%)
1 1403 bp 31.29 9.19 99.86
NECEvent2014_8_1_scaffold_3296 178_001_scaffold_3296
Species: Clostridium perfringens (100%)
1 1421 bp 30.61 6.97 99.86
NECEvent2014_8_1_scaffold_2160 178_001_scaffold_2160
Species: Clostridium perfringens (100%)
1 2199 bp 31.15 11.46 99.86
NECEvent2014_8_1_scaffold_3148 178_001_scaffold_3148
Species: Clostridium perfringens (100%)
1 1487 bp 27.57 5.45 99.87
NECEvent2014_8_1_scaffold_3091 178_001_scaffold_3091
Species: Clostridium perfringens (100%)
1 1517 bp 30.13 5.74 99.87
NECEvent2014_8_1_scaffold_3078 178_001_scaffold_3078
Species: Clostridium perfringens (100%)
1 1523 bp 31.85 12.71 99.87
NECEvent2014_8_1_scaffold_2901 178_001_scaffold_2901
Species: Clostridium perfringens (100%)
1 1628 bp 31.70 7.56 99.88
NECEvent2014_8_1_scaffold_2830 178_001_scaffold_2830
Species: Clostridium perfringens (100%)
2 1667 bp 27.83 6.66 99.88
NECEvent2014_8_1_scaffold_2762 178_001_scaffold_2762
Species: Clostridium perfringens (100%)
2 1709 bp 27.97 4.56 99.88
Displaying items 601-650 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.