ggKbase home page

NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 651-700 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2601 178_001_scaffold_2601
Species: Clostridium perfringens (100%)
1 1811 bp 29.38 5.63 99.89
NECEvent2014_8_1_scaffold_2555 178_001_scaffold_2555
Species: Clostridium perfringens (100%)
1 1841 bp 29.06 5.54 99.89
NECEvent2014_8_1_scaffold_1286 178_001_scaffold_1286
Species: Clostridium perfringens (66.67%)
3 3721 bp 31.87 12.66 99.89
NECEvent2014_8_1_scaffold_2520 178_001_scaffold_2520
Species: Clostridium perfringens (100%)
1 1868 bp 31.32 6.99 99.89
NECEvent2014_8_1_scaffold_2515 178_001_scaffold_2515
Species: Clostridium perfringens (100%)
1 1874 bp 30.10 9.45 99.89
NECEvent2014_8_1_scaffold_1264 178_001_scaffold_1264
Species: Clostridium perfringens (100%)
1 3793 bp 32.27 7.20 99.89
NECEvent2014_8_1_scaffold_2313 178_001_scaffold_2313
Species: Clostridium perfringens (100%)
1 2033 bp 32.86 12.10 99.90
NECEvent2014_8_1_scaffold_4515 178_001_scaffold_4515
Species: Clostridium perfringens (100%)
1 1024 bp 26.27 2.64 99.90
NECEvent2014_8_1_scaffold_2277 178_001_scaffold_2277
Species: Clostridium perfringens (100%)
1 2069 bp 29.10 6.52 99.90
NECEvent2014_8_1_scaffold_2252 178_001_scaffold_2252
Species: Clostridium perfringens (100%)
1 2096 bp 29.34 6.15 99.90
NECEvent2014_8_1_scaffold_4394 178_001_scaffold_4394
Species: Clostridium perfringens (100%)
1 1054 bp 29.51 4.55 99.91
NECEvent2014_8_1_scaffold_2235 178_001_scaffold_2235
Species: Clostridium perfringens (100%)
1 2114 bp 32.73 10.08 99.91
NECEvent2014_8_1_scaffold_4327 178_001_scaffold_4327
Species: Clostridium perfringens (100%)
1 1072 bp 35.91 8.96 99.91
NECEvent2014_8_1_scaffold_4243 178_001_scaffold_4243
Species: Clostridium perfringens (100%)
1 1093 bp 35.77 12.35 99.91
NECEvent2014_8_1_scaffold_4223 178_001_scaffold_4223
Species: Clostridium perfringens (100%)
1 1099 bp 25.93 3.28 99.91
NECEvent2014_8_1_scaffold_4174 178_001_scaffold_4174
Species: Clostridium perfringens (100%)
1 1111 bp 27.90 4.32 99.91
NECEvent2014_8_1_scaffold_4098 178_001_scaffold_4098
Species: Clostridium perfringens (100%)
1 1135 bp 32.25 7.14 99.91
NECEvent2014_8_1_scaffold_4078 178_001_scaffold_4078
Species: Clostridium perfringens (100%)
1 1141 bp 30.50 6.44 99.91
NECEvent2014_8_1_scaffold_1344 178_001_scaffold_1344
Species: Clostridium perfringens (100%)
1 3582 bp 33.36 14.32 99.92
NECEvent2014_8_1_scaffold_3873 178_001_scaffold_3873
Species: Clostridium perfringens (100%)
1 1198 bp 32.47 12.52 99.92
NECEvent2014_8_1_scaffold_3858 178_001_scaffold_3858
Species: Clostridium perfringens (100%)
1 1204 bp 29.15 7.48 99.92
NECEvent2014_8_1_scaffold_1939 178_001_scaffold_1939
Species: Clostridium perfringens (100%)
1 2456 bp 32.04 8.31 99.92
NECEvent2014_8_1_scaffold_3750 178_001_scaffold_3750
Species: Clostridium perfringens (100%)
1 1240 bp 29.76 6.29 99.92
NECEvent2014_8_1_scaffold_1893 178_001_scaffold_1893
Species: Clostridium perfringens (100%)
1 2513 bp 33.03 11.34 99.92
NECEvent2014_8_1_scaffold_3572 178_001_scaffold_3572
Species: Clostridium butyricum (100%)
1 1303 bp 28.24 4.14 99.92
NECEvent2014_8_1_scaffold_1209 178_001_scaffold_1209
Species: Clostridium perfringens (100%)
1 3963 bp 31.42 11.88 99.92
NECEvent2014_8_1_scaffold_3476 178_001_scaffold_3476
Species: Clostridium perfringens (100%)
1 1345 bp 30.41 8.03 99.93
NECEvent2014_8_1_scaffold_3424 178_001_scaffold_3424
Species: Clostridium perfringens (100%)
1 1366 bp 30.01 6.81 99.93
NECEvent2014_8_1_scaffold_3321 178_001_scaffold_3321
Species: Clostridium perfringens (100%)
1 1408 bp 31.25 14.06 99.93
NECEvent2014_8_1_scaffold_3270 178_001_scaffold_3270
Species: Clostridium perfringens (100%)
1 1432 bp 31.08 5.24 99.93
NECEvent2014_8_1_scaffold_3215 178_001_scaffold_3215
Species: Clostridium perfringens (100%)
1 1453 bp 31.25 7.23 99.93
NECEvent2014_8_1_scaffold_3083 178_001_scaffold_3083
Species: Clostridium perfringens (100%)
1 1519 bp 31.73 6.71 99.93
NECEvent2014_8_1_scaffold_3006 178_001_scaffold_3006
Species: Clostridium perfringens (100%)
1 1561 bp 30.75 6.53 99.94
NECEvent2014_8_1_scaffold_2958 178_001_scaffold_2958
Species: Clostridium pasteurianum (100%)
1 1591 bp 26.02 9.05 99.94
NECEvent2014_8_1_scaffold_1473 178_001_scaffold_1473
Species: Clostridium perfringens (100%)
1 3251 bp 32.21 9.37 99.94
NECEvent2014_8_1_scaffold_1451 178_001_scaffold_1451
Species: Clostridium perfringens (100%)
1 3290 bp 31.37 6.84 99.94
NECEvent2014_8_1_scaffold_2233 178_001_scaffold_2233
Species: Clostridium perfringens (100%)
1 2116 bp 30.39 7.37 99.95
NECEvent2014_8_1_scaffold_1666 178_001_scaffold_1666
Species: Clostridium perfringens (100%)
1 2854 bp 28.31 5.31 99.97
NECEvent2014_8_1_scaffold_799 178_001_scaffold_799
Species: Clostridium perfringens (100%)
1 5846 bp 31.65 9.85 99.97
NECEvent2014_8_1_scaffold_1503 178_001_scaffold_1503
Species: Clostridium perfringens (80%)
5 3166 bp 31.14 6.21 99.97
NECEvent2014_8_1_scaffold_1358 178_001_scaffold_1358
Species: Clostridium perfringens (100%)
1 3532 bp 32.98 9.85 99.97
NECEvent2014_8_1_scaffold_3606 178_001_scaffold_3606
Species: Clostridium perfringens (100%)
1 1290 bp 31.40 9.77 100.00
NECEvent2014_8_1_scaffold_4390 178_001_scaffold_4390
Species: Clostridium perfringens (100%)
1 1056 bp 26.80 4.55 100.00
NECEvent2014_8_1_scaffold_4135 178_001_scaffold_4135
Species: Clostridium perfringens (100%)
1 1122 bp 31.55 8.82 100.00
NECEvent2014_8_1_scaffold_4419 178_001_scaffold_4419
Species: Clostridium perfringens (100%)
1 1050 bp 29.90 15.71 100.00
NECEvent2014_8_1_scaffold_3944 178_001_scaffold_3944
Species: Clostridium perfringens (100%)
1 1176 bp 34.52 8.16 100.00
NECEvent2014_8_1_scaffold_2936 178_001_scaffold_2936
Species: Clostridium perfringens (100%)
1 1608 bp 32.03 9.51 100.00
NECEvent2014_8_1_scaffold_4524 178_001_scaffold_4524
Species: Clostridium perfringens (100%)
1 1023 bp 31.87 9.38 100.00
NECEvent2014_8_1_scaffold_3759 178_001_scaffold_3759
Species: Clostridium perfringens (100%)
1 1236 bp 28.32 6.07 100.00
NECEvent2014_8_1_scaffold_2256 178_001_scaffold_2256
Species: Clostridium perfringens (100%)
1 2091 bp 30.75 8.32 100.00
Displaying items 651-700 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.