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NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

NECEvent2014_8_1_Clostridium_perfringens_31_10
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 351-400 of 731 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2129 178_001_scaffold_2129
Species: Clostridium perfringens (100%)
2 2227 bp 29.41 6.40 94.70
NECEvent2014_8_1_scaffold_2626 178_001_scaffold_2626
Species: Clostridium botulinum (66.67%)
3 1792 bp 26.84 9.04 94.75
NECEvent2014_8_1_scaffold_2945 178_001_scaffold_2945
Species: Clostridium perfringens (100%)
1 1602 bp 31.71 10.30 94.76
NECEvent2014_8_1_scaffold_1663 178_001_scaffold_1663
Species: Clostridium perfringens (100%)
3 2858 bp 28.38 5.88 94.79
NECEvent2014_8_1_scaffold_1491 178_001_scaffold_1491
Species: Clostridium perfringens (100%)
3 3199 bp 31.42 9.71 94.81
NECEvent2014_8_1_scaffold_2462 178_001_scaffold_2462
Species: Clostridium perfringens (100%)
2 1909 bp 28.76 5.74 94.92
NECEvent2014_8_1_scaffold_4333 178_001_scaffold_4333
Species: Clostridium perfringens (100%)
2 1071 bp 29.23 4.48 94.96
NECEvent2014_8_1_scaffold_1504 178_001_scaffold_1504
Species: Clostridium perfringens (100%)
1 3165 bp 32.10 10.62 94.98
NECEvent2014_8_1_scaffold_1319 178_001_scaffold_1319
Species: Clostridium perfringens (100%)
4 3631 bp 30.74 5.45 95.02
NECEvent2014_8_1_scaffold_3677 178_001_scaffold_3677
Species: Clostridium perfringens (100%)
2 1266 bp 30.73 6.16 95.02
NECEvent2014_8_1_scaffold_2030 178_001_scaffold_2030
Species: Clostridium perfringens (100%)
2 2339 bp 32.15 6.67 95.04
NECEvent2014_8_1_scaffold_4165 178_001_scaffold_4165
Species: Clostridium perfringens (100%)
2 1114 bp 29.26 5.12 95.06
NECEvent2014_8_1_scaffold_4214 178_001_scaffold_4214
Species: Clostridium perfringens (100%)
2 1101 bp 32.88 6.95 95.10
NECEvent2014_8_1_scaffold_2479 178_001_scaffold_2479
Species: Clostridium perfringens (100%)
1 1899 bp 32.28 12.32 95.10
NECEvent2014_8_1_scaffold_1631 178_001_scaffold_1631
Species: Clostridium perfringens (100%)
3 2911 bp 29.71 6.18 95.12
NECEvent2014_8_1_scaffold_4513 178_001_scaffold_4513
Species: Clostridium perfringens (100%)
2 1025 bp 29.46 6.73 95.12
NECEvent2014_8_1_scaffold_4046 178_001_scaffold_4046
Species: Clostridium perfringens (100%)
1 1148 bp 31.45 8.49 95.12
NECEvent2014_8_1_scaffold_2897 178_001_scaffold_2897
Species: Clostridium perfringens (100%)
1 1630 bp 30.86 6.26 95.15
NECEvent2014_8_1_scaffold_1587 178_001_scaffold_1587
Species: Clostridium perfringens (100%)
2 2985 bp 33.97 15.18 95.18
NECEvent2014_8_1_scaffold_2403 178_001_scaffold_2403
Species: Clostridium perfringens (100%)
3 1954 bp 29.17 5.68 95.19
NECEvent2014_8_1_scaffold_3662 178_001_scaffold_3662
Species: Clostridium perfringens (100%)
1 1270 bp 31.18 7.32 95.20
NECEvent2014_8_1_scaffold_1754 178_001_scaffold_1754
Species: Clostridium perfringens (100%)
2 2703 bp 35.26 11.21 95.23
NECEvent2014_8_1_scaffold_4507 178_001_scaffold_4507
Species: Clostridium perfringens (100%)
2 1026 bp 31.29 9.65 95.32
NECEvent2014_8_1_scaffold_1664 178_001_scaffold_1664
Species: Clostridium perfringens (100%)
2 2857 bp 30.73 7.25 95.34
NECEvent2014_8_1_scaffold_3053 178_001_scaffold_3053
Species: Clostridium perfringens (100%)
2 1532 bp 26.96 3.52 95.37
NECEvent2014_8_1_scaffold_2814 178_001_scaffold_2814
Species: Clostridium perfringens (100%)
1 1679 bp 30.67 5.18 95.41
NECEvent2014_8_1_scaffold_2984 178_001_scaffold_2984
Species: Clostridium perfringens (100%)
1 1575 bp 31.56 10.48 95.43
NECEvent2014_8_1_scaffold_3790 178_001_scaffold_3790
Species: Clostridium perfringens (100%)
1 1226 bp 31.00 7.10 95.43
NECEvent2014_8_1_scaffold_1071 178_001_scaffold_1071
Species: Clostridium perfringens (100%)
2 4346 bp 31.27 10.22 95.47
NECEvent2014_8_1_scaffold_3157 178_001_scaffold_3157
Species: Clostridium perfringens (100%)
2 1483 bp 29.53 7.08 95.48
NECEvent2014_8_1_scaffold_1679 178_001_scaffold_1679
Species: Clostridium perfringens (50%)
2 2836 bp 30.75 10.47 95.52
NECEvent2014_8_1_scaffold_4489 178_001_scaffold_4489
Species: Clostridium perfringens (100%)
1 1030 bp 32.52 15.15 95.53
NECEvent2014_8_1_scaffold_378 178_001_scaffold_378
Species: Clostridium perfringens (100%)
9 10720 bp 32.46 14.61 95.54
NECEvent2014_8_1_scaffold_3326 178_001_scaffold_3326
Species: Clostridium perfringens (100%)
1 1406 bp 32.50 9.39 95.59
NECEvent2014_8_1_scaffold_4320 178_001_scaffold_4320
Species: Clostridium perfringens (100%)
1 1073 bp 32.25 6.71 95.62
NECEvent2014_8_1_scaffold_4100 178_001_scaffold_4100
Species: Clostridium perfringens (100%)
2 1135 bp 32.42 15.20 95.68
NECEvent2014_8_1_scaffold_3105 178_001_scaffold_3105
Species: Clostridium perfringens (100%)
2 1511 bp 27.99 7.54 95.70
NECEvent2014_8_1_scaffold_4231 178_001_scaffold_4231
Species: Clostridium perfringens (100%)
1 1097 bp 30.36 10.39 95.72
NECEvent2014_8_1_scaffold_2881 178_001_scaffold_2881
Species: Clostridium perfringens (100%)
2 1639 bp 30.45 6.96 95.73
NECEvent2014_8_1_scaffold_3676 178_001_scaffold_3676
Species: Clostridium perfringens (75%)
4 1266 bp 26.86 3.91 95.73
NECEvent2014_8_1_scaffold_3804 178_001_scaffold_3804
Species: Clostridium perfringens (100%)
1 1222 bp 29.95 7.36 95.74
NECEvent2014_8_1_scaffold_2273 178_001_scaffold_2273
Species: Clostridium perfringens (100%)
2 2074 bp 31.73 8.97 95.76
NECEvent2014_8_1_scaffold_3004 178_001_scaffold_3004
Species: Clostridium perfringens (100%)
2 1563 bp 31.80 12.67 95.78
NECEvent2014_8_1_scaffold_2714 178_001_scaffold_2714
Species: Clostridium perfringens (100%)
3 1735 bp 31.64 5.97 95.79
NECEvent2014_8_1_scaffold_2367 178_001_scaffold_2367
Species: Clostridium perfringens (100%)
1 1982 bp 31.03 10.97 95.81
NECEvent2014_8_1_scaffold_2116 178_001_scaffold_2116
Species: Clostridium perfringens (100%)
2 2240 bp 31.12 7.50 95.89
NECEvent2014_8_1_scaffold_4114 178_001_scaffold_4114
Species: Clostridium perfringens (100%)
2 1129 bp 28.08 5.05 95.93
NECEvent2014_8_1_scaffold_1487 178_001_scaffold_1487
Genus: Clostridium (100%)
5 3208 bp 26.75 7.86 95.95
NECEvent2014_8_1_scaffold_2146 178_001_scaffold_2146
Species: Clostridium perfringens (100%)
2 2210 bp 32.13 9.37 95.97
NECEvent2014_8_1_scaffold_952 178_001_scaffold_952
Species: Clostridium perfringens (100%)
2 4903 bp 35.75 24.29 96.00
Displaying items 351-400 of 731 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.