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NECEvent2014_8_4_Clostridium_paraputrificum_31_73

NECEvent2014_8_4_Clostridium_30_41
In projects: NECEvent2014_8_4

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

ID based on rpS3

Displaying items 101-115 of 115 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_373 178_004_scaffold_373
Genus: Clostridium (66.67%)
15 14914 bp 28.89 30.43 89.07
NECEvent2014_8_4_scaffold_85 178_004_scaffold_85
Genus: Clostridium (66.67%)
51 37117 bp 27.17 29.71 82.52
NECEvent2014_8_4_scaffold_303 178_004_scaffold_303
Genus: Clostridium (66.67%)
18 17535 bp 27.61 29.47 85.01
NECEvent2014_8_4_scaffold_262 178_004_scaffold_262
Genus: Clostridium (51.85%)
27 19211 bp 28.76 29.19 78.16
NECEvent2014_8_4_scaffold_327 178_004_scaffold_327
Genus: Clostridium (53.33%)
15 16744 bp 26.62 28.99 90.41
NECEvent2014_8_4_scaffold_543 178_004_scaffold_543
Species: Clostridium sulfidigenes (50%)
14 11200 bp 27.08 28.92 80.06
NECEvent2014_8_4_scaffold_2341 178_004_scaffold_2341
Genus: Clostridium (50%)
6 2816 bp 29.55 28.76 74.43
NECEvent2014_8_4_scaffold_363 178_004_scaffold_363
Genus: Clostridium (85.71%)
14 15158 bp 28.46 27.61 93.77
NECEvent2014_8_4_scaffold_1016 178_004_scaffold_1016
Genus: Clostridium (100%)
9 6414 bp 26.61 27.43 82.46
NECEvent2014_8_4_scaffold_1215 178_004_scaffold_1215
Genus: Clostridium (100%)
5 5292 bp 27.95 26.90 87.02
NECEvent2014_8_4_scaffold_969 178_004_scaffold_969
Order: Clostridiales (63.64%)
11 6724 bp 27.14 26.88 77.50
NECEvent2014_8_4_scaffold_928 178_004_scaffold_928
Phylum: Firmicutes (88.89%)
9 6987 bp 27.06 26.77 76.43
NECEvent2014_8_4_scaffold_423 178_004_scaffold_423
Genus: Clostridium (60%)
10 13704 bp 28.47 26.75 89.36
NECEvent2014_8_4_scaffold_280 178_004_scaffold_280
Genus: Clostridium (62.5%)
16 18316 bp 27.01 25.09 88.30
NECEvent2014_8_4_scaffold_3037 178_004_scaffold_3037
Species: Clostridium perfringens (66.67%)
6 3132 bp 33.40 25.05 87.48
Displaying items 101-115 of 115 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.