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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 201-250 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_5463 178_004_scaffold_5463
Species: Streptococcus mitis (100%)
1 1057 bp 40.78 4.82 99.91
NECEvent2014_8_4_scaffold_2195 178_004_scaffold_2195
Species: Streptococcus mitis (75%)
4 2986 bp 40.22 4.82 96.55
NECEvent2014_8_4_scaffold_3255 178_004_scaffold_3255
Species: Streptococcus mitis (100%)
1 1924 bp 43.71 4.83 88.72
NECEvent2014_8_4_scaffold_3820 178_004_scaffold_3820
Species: Streptococcus mitis (66.67%)
3 1616 bp 44.18 4.83 91.34
NECEvent2014_8_4_scaffold_3826 178_004_scaffold_3826
Species: Streptococcus mitis (100%)
1 1614 bp 36.49 4.83 100.00
NECEvent2014_8_4_scaffold_2572 178_004_scaffold_2572
Species: Streptococcus sp. HSISS1 (50%)
4 2546 bp 41.56 4.83 94.38
NECEvent2014_8_4_scaffold_1972 178_004_scaffold_1972
Species: Streptococcus mitis (100%)
4 3287 bp 43.50 4.84 96.84
NECEvent2014_8_4_scaffold_4502 178_004_scaffold_4502
Species: Streptococcus mitis (50%)
2 1331 bp 42.15 4.85 93.99
NECEvent2014_8_4_scaffold_3855 178_004_scaffold_3855
Species: Streptococcus mitis (66.67%)
3 1601 bp 43.22 4.87 101.75
NECEvent2014_8_4_scaffold_2857 178_004_scaffold_2857
Species: Streptococcus mitis (75%)
4 2249 bp 40.37 4.87 83.24
NECEvent2014_8_4_scaffold_3190 178_004_scaffold_3190
Species: Streptococcus mitis (100%)
2 1966 bp 43.18 4.88 94.00
NECEvent2014_8_4_scaffold_5049 178_004_scaffold_5049
Species: Streptococcus mitis (100%)
2 1168 bp 42.21 4.88 94.78
NECEvent2014_8_4_scaffold_3551 178_004_scaffold_3551
Species: Streptococcus mitis (100%)
2 1753 bp 38.79 4.88 99.43
NECEvent2014_8_4_scaffold_1262 178_004_scaffold_1262
Species: Streptococcus mitis (83.33%)
6 5007 bp 38.35 4.88 96.58
NECEvent2014_8_4_scaffold_2778 178_004_scaffold_2778
Species: Streptococcus mitis (100%)
3 2331 bp 38.44 4.89 66.02
NECEvent2014_8_4_scaffold_2832 178_004_scaffold_2832
Genus: Streptococcus (100%)
3 2271 bp 39.54 4.89 95.90
NECEvent2014_8_4_scaffold_799 178_004_scaffold_799
Species: Streptococcus mitis (76.92%)
13 8181 bp 41.87 4.91 93.62
NECEvent2014_8_4_scaffold_1462 178_004_scaffold_1462
Species: Streptococcus mitis (80%)
5 4295 bp 41.14 4.92 87.24
NECEvent2014_8_4_scaffold_1328 178_004_scaffold_1328
Species: Streptococcus mitis (60%)
5 4820 bp 42.72 4.92 93.86
NECEvent2014_8_4_scaffold_2879 178_004_scaffold_2879
Genus: Streptococcus (100%)
3 2223 bp 40.71 4.93 77.46
NECEvent2014_8_4_scaffold_2326 178_004_scaffold_2326
Species: Streptococcus mitis (100%)
2 2829 bp 42.77 4.93 92.36
NECEvent2014_8_4_scaffold_4185 178_004_scaffold_4185
Genus: Streptococcus (66.67%)
3 1454 bp 40.03 4.95 99.45
NECEvent2014_8_4_scaffold_3473 178_004_scaffold_3473
Species: Streptococcus mitis (100%)
2 1787 bp 40.74 4.95 89.82
NECEvent2014_8_4_scaffold_2305 178_004_scaffold_2305
Genus: Streptococcus (100%)
3 2851 bp 40.69 4.95 89.34
NECEvent2014_8_4_scaffold_2064 178_004_scaffold_2064
Species: Streptococcus sp. HSISS3 (60%)
5 3151 bp 41.32 4.95 91.40
NECEvent2014_8_4_scaffold_4189 178_004_scaffold_4189
Species: Streptococcus mitis (100%)
2 1453 bp 34.69 4.96 99.93
NECEvent2014_8_4_scaffold_4703 178_004_scaffold_4703
Species: Streptococcus infantis (100%)
1 1267 bp 46.88 4.97 99.92
NECEvent2014_8_4_scaffold_4508 178_004_scaffold_4508
Species: Streptococcus mitis (100%)
1 1328 bp 40.59 4.97 99.85
NECEvent2014_8_4_scaffold_2032 178_004_scaffold_2032
Species: Streptococcus mitis (100%)
2 3200 bp 44.59 4.97 96.56
NECEvent2014_8_4_scaffold_3337 178_004_scaffold_3337
Species: Streptococcus mitis (100%)
1 1873 bp 41.16 4.97 90.34
NECEvent2014_8_4_scaffold_2647 178_004_scaffold_2647
Species: Streptococcus mitis (100%)
2 2469 bp 40.91 4.98 96.11
NECEvent2014_8_4_scaffold_1672 178_004_scaffold_1672
Species: Streptococcus mitis (100%)
4 3825 bp 40.00 4.98 92.31
NECEvent2014_8_4_scaffold_3622 178_004_scaffold_3622
Species: Streptococcus mitis (100%)
1 1717 bp 44.38 4.98 99.94
NECEvent2014_8_4_scaffold_3159 178_004_scaffold_3159
Genus: Streptococcus (100%)
3 1984 bp 44.00 4.99 92.24
NECEvent2014_8_4_scaffold_4365 178_004_scaffold_4365
Species: Streptococcus mitis (100%)
3 1382 bp 45.08 4.99 101.81
NECEvent2014_8_4_scaffold_1056 178_004_scaffold_1056
Species: Streptococcus mitis (50%)
6 6070 bp 43.16 4.99 93.71
NECEvent2014_8_4_scaffold_1857 178_004_scaffold_1857
Species: Streptococcus salivarius (60%)
5 3479 bp 42.68 5.00 94.16
NECEvent2014_8_4_scaffold_2543 178_004_scaffold_2543
Species: Streptococcus sp. HSISS2 (50%)
4 2578 bp 39.64 5.00 82.85
NECEvent2014_8_4_scaffold_2071 178_004_scaffold_2071
Species: Streptococcus mitis (75%)
4 3144 bp 42.14 5.01 95.23
NECEvent2014_8_4_scaffold_4546 178_004_scaffold_4546
Species: Streptococcus mitis (100%)
3 1314 bp 42.85 5.02 99.09
NECEvent2014_8_4_scaffold_5381 178_004_scaffold_5381
Species: Streptococcus mitis (100%)
2 1076 bp 38.48 5.02 86.71
NECEvent2014_8_4_scaffold_5151 178_004_scaffold_5151
Species: Streptococcus mitis (100%)
2 1135 bp 44.14 5.02 93.83
NECEvent2014_8_4_scaffold_4042 178_004_scaffold_4042
Species: Streptococcus mitis (50%)
2 1521 bp 41.95 5.03 97.24
NECEvent2014_8_4_scaffold_1035 178_004_scaffold_1035
Species: Streptococcus mitis (100%)
7 6266 bp 43.25 5.03 91.16
NECEvent2014_8_4_scaffold_5169 178_004_scaffold_5169
Species: Streptococcus mitis (66.67%)
3 1131 bp 41.03 5.04 96.29
NECEvent2014_8_4_scaffold_2621 178_004_scaffold_2621
Genus: Streptococcus (100%)
3 2496 bp 42.83 5.05 98.44
NECEvent2014_8_4_scaffold_737 178_004_scaffold_737
Genus: Streptococcus (100%)
11 8736 bp 40.74 5.05 95.23
NECEvent2014_8_4_scaffold_2795 178_004_scaffold_2795
Species: Streptococcus mitis (100%)
3 2315 bp 41.04 5.05 93.95
NECEvent2014_8_4_scaffold_973 178_004_scaffold_973
Genus: Streptococcus (100%)
7 6701 bp 43.62 5.06 88.82
NECEvent2014_8_4_scaffold_1506 178_004_scaffold_1506
Species: Streptococcus mitis (100%)
6 4207 bp 37.53 5.06 99.26
Displaying items 201-250 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.