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NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2119 178_004_scaffold_2119
Genus: Streptococcus (100%)
3 3080 bp 43.54 4.58 97.79
NECEvent2014_8_4_scaffold_2023 178_004_scaffold_2023
Species: Streptococcus mitis (50%)
4 3211 bp 39.40 4.58 92.12
NECEvent2014_8_4_scaffold_3918 178_004_scaffold_3918
Genus: Streptococcus (100%)
3 1570 bp 39.75 4.59 99.55
NECEvent2014_8_4_scaffold_3352 178_004_scaffold_3352
Species: Streptococcus pneumoniae (50%)
2 1862 bp 40.87 4.59 87.33
NECEvent2014_8_4_scaffold_2078 178_004_scaffold_2078
Species: Streptococcus mitis (50%)
4 3136 bp 43.18 4.59 89.64
NECEvent2014_8_4_scaffold_4394 178_004_scaffold_4394
Species: Streptococcus mitis (100%)
2 1373 bp 39.55 4.59 100.07
NECEvent2014_8_4_scaffold_3526 178_004_scaffold_3526
Species: Streptococcus mitis (100%)
3 1761 bp 43.44 4.60 94.21
NECEvent2014_8_4_scaffold_4324 178_004_scaffold_4324
Genus: Streptococcus (100%)
3 1398 bp 38.98 4.61 70.17
NECEvent2014_8_4_scaffold_4245 178_004_scaffold_4245
Species: Streptococcus mitis (100%)
3 1429 bp 41.29 4.62 93.42
NECEvent2014_8_4_scaffold_2904 178_004_scaffold_2904
Species: Streptococcus mitis (100%)
2 2202 bp 43.55 4.63 95.91
NECEvent2014_8_4_scaffold_3953 178_004_scaffold_3953
Genus: Streptococcus (100%)
3 1556 bp 43.89 4.63 97.56
NECEvent2014_8_4_scaffold_2198 178_004_scaffold_2198
Species: Streptococcus mitis (75%)
4 2980 bp 43.76 4.63 90.70
NECEvent2014_8_4_scaffold_3228 178_004_scaffold_3228
Species: Streptococcus mitis (100%)
1 1944 bp 39.61 4.63 96.91
NECEvent2014_8_4_scaffold_3695 178_004_scaffold_3695
Species: Streptococcus mitis (100%)
1 1682 bp 43.52 4.64 99.88
NECEvent2014_8_4_scaffold_4268 178_004_scaffold_4268
Species: Streptococcus mitis (100%)
2 1421 bp 41.52 4.64 100.07
NECEvent2014_8_4_scaffold_5581 178_004_scaffold_5581
Species: Streptococcus mitis (100%)
1 1032 bp 37.11 4.65 99.71
NECEvent2014_8_4_scaffold_4622 178_004_scaffold_4622
Species: Streptococcus mitis (66.67%)
3 1290 bp 43.49 4.65 96.05
NECEvent2014_8_4_scaffold_4849 178_004_scaffold_4849
Species: Streptococcus mitis (50%)
2 1221 bp 42.10 4.67 97.05
NECEvent2014_8_4_scaffold_2336 178_004_scaffold_2336
Species: Streptococcus mitis (50%)
4 2819 bp 43.70 4.68 97.59
NECEvent2014_8_4_scaffold_4472 178_004_scaffold_4472
Species: Streptococcus mitis (100%)
2 1341 bp 41.69 4.70 92.17
NECEvent2014_8_4_scaffold_3276 178_004_scaffold_3276
Species: Streptococcus mitis (100%)
1 1913 bp 41.14 4.70 98.95
NECEvent2014_8_4_scaffold_2290 178_004_scaffold_2290
Species: Streptococcus sp. HSISS2 (60%)
5 2870 bp 39.93 4.70 80.28
NECEvent2014_8_4_scaffold_2313 178_004_scaffold_2313
Species: Streptococcus mitis (66.67%)
3 2843 bp 38.13 4.70 96.03
NECEvent2014_8_4_scaffold_1325 178_004_scaffold_1325
Genus: Streptococcus (100%)
5 4826 bp 42.58 4.72 94.61
NECEvent2014_8_4_scaffold_3143 178_004_scaffold_3143
Species: Streptococcus mitis (66.67%)
3 1997 bp 39.26 4.73 95.99
NECEvent2014_8_4_scaffold_3489 178_004_scaffold_3489
Species: Streptococcus mitis (100%)
3 1777 bp 38.89 4.73 72.76
NECEvent2014_8_4_scaffold_4041 178_004_scaffold_4041
Species: Streptococcus sp. HSISS3 (66.67%)
3 1521 bp 43.13 4.73 95.66
NECEvent2014_8_4_scaffold_4049 178_004_scaffold_4049
Species: Streptococcus mitis (100%)
1 1518 bp 43.08 4.74 100.00
NECEvent2014_8_4_scaffold_5050 178_004_scaffold_5050
Species: Streptococcus mitis (100%)
2 1168 bp 45.80 4.75 100.43
NECEvent2014_8_4_scaffold_3579 178_004_scaffold_3579
Species: Streptococcus mitis (66.67%)
3 1737 bp 33.85 4.75 90.67
NECEvent2014_8_4_scaffold_4608 178_004_scaffold_4608
Species: Streptococcus mitis (100%)
2 1295 bp 41.24 4.75 94.75
NECEvent2014_8_4_scaffold_1662 178_004_scaffold_1662
Species: Streptococcus mitis (60%)
5 3841 bp 40.80 4.76 96.93
NECEvent2014_8_4_scaffold_3586 178_004_scaffold_3586
Species: Streptococcus mitis (66.67%)
3 1733 bp 44.26 4.76 91.23
NECEvent2014_8_4_scaffold_4204 178_004_scaffold_4204
Species: Streptococcus mitis (100%)
2 1446 bp 39.35 4.77 92.53
NECEvent2014_8_4_scaffold_3224 178_004_scaffold_3224
Species: Streptococcus mitis (100%)
2 1948 bp 40.97 4.77 90.25
NECEvent2014_8_4_scaffold_4070 178_004_scaffold_4070
Species: Streptococcus mitis (66.67%)
3 1508 bp 41.05 4.77 98.08
NECEvent2014_8_4_scaffold_4451 178_004_scaffold_4451
Species: Streptococcus sp. DORA_10 (100%)
1 1350 bp 41.63 4.78 84.22
NECEvent2014_8_4_scaffold_2461 178_004_scaffold_2461
Species: Streptococcus mitis (100%)
2 2668 bp 40.82 4.78 95.13
NECEvent2014_8_4_scaffold_1989 178_004_scaffold_1989
Genus: Streptococcus (100%)
5 3264 bp 37.81 4.78 76.93
NECEvent2014_8_4_scaffold_2275 178_004_scaffold_2275
Genus: Streptococcus (100%)
3 2886 bp 42.41 4.78 94.80
NECEvent2014_8_4_scaffold_3079 178_004_scaffold_3079
Species: Streptococcus mitis (100%)
3 2041 bp 39.29 4.78 98.04
NECEvent2014_8_4_scaffold_4375 178_004_scaffold_4375
Species: Streptococcus mitis (100%)
1 1378 bp 41.15 4.79 97.53
NECEvent2014_8_4_scaffold_2981 178_004_scaffold_2981
Species: Streptococcus mitis (50%)
2 2127 bp 38.69 4.80 90.27
NECEvent2014_8_4_scaffold_1808 178_004_scaffold_1808
Species: Streptococcus mitis (100%)
1 3563 bp 42.86 4.80 99.94
NECEvent2014_8_4_scaffold_1369 178_004_scaffold_1369
Species: Streptococcus mitis (66.67%)
6 4612 bp 41.83 4.81 95.36
NECEvent2014_8_4_scaffold_4471 178_004_scaffold_4471
Species: Streptococcus mitis (100%)
3 1342 bp 45.08 4.81 96.80
NECEvent2014_8_4_scaffold_4555 178_004_scaffold_4555
Genus: Streptococcus (100%)
3 1311 bp 36.16 4.81 100.23
NECEvent2014_8_4_scaffold_2764 178_004_scaffold_2764
Species: Streptococcus mitis (100%)
1 2340 bp 41.84 4.81 77.95
NECEvent2014_8_4_scaffold_3627 178_004_scaffold_3627
Species: Streptococcus mitis (100%)
2 1715 bp 43.73 4.81 96.04
NECEvent2014_8_4_scaffold_1870 178_004_scaffold_1870
Species: Streptococcus sp. M334 (66.67%)
3 3455 bp 37.22 4.82 89.00
Displaying items 151-200 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.