ggKbase home page

NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

NECEvent2014_8_4_Streptococcus_mitis_41_5
In projects: NECEvent2014_8_4

Consensus taxonomy: Streptococcus mitis  →  Streptococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 486 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_3530 178_004_scaffold_3530
Species: Streptococcus sp. DORA_10 (50%)
2 1760 bp 42.73 3.92 96.65
NECEvent2014_8_4_scaffold_5427 178_004_scaffold_5427
Species: Streptococcus mitis (50%)
2 1065 bp 36.43 3.94 101.41
NECEvent2014_8_4_scaffold_3718 178_004_scaffold_3718
Genus: Streptococcus (100%)
3 1669 bp 38.59 3.95 82.50
NECEvent2014_8_4_scaffold_4231 178_004_scaffold_4231
Species: Streptococcus mitis (100%)
3 1435 bp 37.00 3.97 58.75
NECEvent2014_8_4_scaffold_4232 178_004_scaffold_4232
Species: Streptococcus mitis (100%)
2 1435 bp 42.93 3.97 87.39
NECEvent2014_8_4_scaffold_2807 178_004_scaffold_2807
Genus: Streptococcus (100%)
3 2306 bp 42.84 3.97 97.44
NECEvent2014_8_4_scaffold_5472 178_004_scaffold_5472
Species: Streptococcus mitis (100%)
1 1055 bp 40.38 3.98 99.81
NECEvent2014_8_4_scaffold_4906 178_004_scaffold_4906
Species: Streptococcus mitis (100%)
3 1205 bp 40.00 3.98 98.09
NECEvent2014_8_4_scaffold_5181 178_004_scaffold_5181
Species: Streptococcus mitis (66.67%)
3 1127 bp 37.98 3.99 84.38
NECEvent2014_8_4_scaffold_5183 178_004_scaffold_5183
Species: Streptococcus sp. M334 (50%)
2 1127 bp 40.91 3.99 83.58
NECEvent2014_8_4_scaffold_2638 178_004_scaffold_2638
Species: Streptococcus mitis (100%)
3 2477 bp 39.89 4.00 91.68
NECEvent2014_8_4_scaffold_4186 178_004_scaffold_4186
Species: Streptococcus mitis (100%)
1 1454 bp 33.77 4.02 91.82
NECEvent2014_8_4_scaffold_4021 178_004_scaffold_4021
Species: Streptococcus sp. HSISS2 (66.67%)
3 1529 bp 40.88 4.02 98.69
NECEvent2014_8_4_scaffold_3353 178_004_scaffold_3353
Species: Streptococcus sp. C150 (66.67%)
3 1862 bp 41.84 4.03 85.71
NECEvent2014_8_4_scaffold_5692 178_004_scaffold_5692
Species: Streptococcus mitis (100%)
2 1003 bp 39.18 4.04 100.20
NECEvent2014_8_4_scaffold_3950 178_004_scaffold_3950
Species: Streptococcus mitis (100%)
2 1557 bp 42.13 4.05 98.07
NECEvent2014_8_4_scaffold_2960 178_004_scaffold_2960
Species: Streptococcus mitis (100%)
2 2147 bp 41.64 4.05 95.58
NECEvent2014_8_4_scaffold_1566 178_004_scaffold_1566
Species: Streptococcus mitis (100%)
3 4071 bp 40.06 4.05 83.71
NECEvent2014_8_4_scaffold_5573 178_004_scaffold_5573
Species: Streptococcus mitis (100%)
1 1034 bp 41.88 4.06 99.81
NECEvent2014_8_4_scaffold_2450 178_004_scaffold_2450
Species: Streptococcus mitis (80%)
5 2684 bp 40.35 4.08 93.33
NECEvent2014_8_4_scaffold_4766 178_004_scaffold_4766
Species: Streptococcus mitis (100%)
1 1250 bp 34.88 4.08 99.84
NECEvent2014_8_4_scaffold_3408 178_004_scaffold_3408
Genus: Streptococcus (100%)
3 1828 bp 39.88 4.10 98.63
NECEvent2014_8_4_scaffold_3846 178_004_scaffold_3846
Species: Streptococcus mitis (100%)
2 1606 bp 35.24 4.11 100.13
NECEvent2014_8_4_scaffold_3706 178_004_scaffold_3706
Genus: Streptococcus (100%)
3 1673 bp 36.28 4.12 77.82
NECEvent2014_8_4_scaffold_1698 178_004_scaffold_1698
Genus: Streptococcus (100%)
3 3786 bp 40.36 4.12 98.02
NECEvent2014_8_4_scaffold_2449 178_004_scaffold_2449
Species: Streptococcus mitis (75%)
4 2685 bp 43.31 4.13 99.89
NECEvent2014_8_4_scaffold_3780 178_004_scaffold_3780
Species: Streptococcus pseudopneumoniae (100%)
1 1636 bp 41.63 4.13 86.19
NECEvent2014_8_4_scaffold_2120 178_004_scaffold_2120
Species: Streptococcus mitis (50%)
4 3077 bp 41.66 4.14 86.58
NECEvent2014_8_4_scaffold_5208 178_004_scaffold_5208
Species: Streptococcus mitis (100%)
2 1122 bp 41.98 4.14 98.13
NECEvent2014_8_4_scaffold_2206 178_004_scaffold_2206
Species: Streptococcus mitis (100%)
3 2967 bp 41.96 4.15 94.64
NECEvent2014_8_4_scaffold_1951 178_004_scaffold_1951
Genus: Streptococcus (100%)
5 3328 bp 40.90 4.15 92.22
NECEvent2014_8_4_scaffold_3326 178_004_scaffold_3326
Species: Streptococcus mitis (75%)
4 1878 bp 38.29 4.15 77.00
NECEvent2014_8_4_scaffold_3971 178_004_scaffold_3971
Species: Streptococcus mitis (100%)
1 1547 bp 37.10 4.17 99.87
NECEvent2014_8_4_scaffold_2702 178_004_scaffold_2702
Species: Streptococcus mitis (50%)
4 2410 bp 39.34 4.17 79.54
NECEvent2014_8_4_scaffold_3902 178_004_scaffold_3902
Species: Streptococcus mitis (100%)
3 1577 bp 42.80 4.19 98.35
NECEvent2014_8_4_scaffold_2203 178_004_scaffold_2203
Species: Streptococcus mitis (75%)
4 2969 bp 43.21 4.19 99.83
NECEvent2014_8_4_scaffold_2551 178_004_scaffold_2551
Species: Streptococcus mitis (50%)
4 2570 bp 42.57 4.20 87.20
NECEvent2014_8_4_scaffold_4874 178_004_scaffold_4874
Species: Streptococcus mitis (66.67%)
3 1215 bp 39.92 4.20 91.11
NECEvent2014_8_4_scaffold_4642 178_004_scaffold_4642
Species: Streptococcus mitis (100%)
1 1285 bp 40.78 4.20 99.92
NECEvent2014_8_4_scaffold_3480 178_004_scaffold_3480
Species: Streptococcus mitis (100%)
3 1781 bp 43.85 4.21 100.56
NECEvent2014_8_4_scaffold_4885 178_004_scaffold_4885
Species: Streptococcus mitis (100%)
1 1211 bp 35.51 4.21 79.77
NECEvent2014_8_4_scaffold_3714 178_004_scaffold_3714
Species: Streptococcus mitis (100%)
2 1671 bp 44.76 4.22 94.97
NECEvent2014_8_4_scaffold_4024 178_004_scaffold_4024
Species: Streptococcus mitis (100%)
2 1528 bp 34.10 4.22 81.09
NECEvent2014_8_4_scaffold_5584 178_004_scaffold_5584
Genus: Streptococcus (66.67%)
3 1032 bp 34.01 4.22 79.07
NECEvent2014_8_4_scaffold_4096 178_004_scaffold_4096
Species: Streptococcus mitis (100%)
2 1493 bp 39.65 4.22 90.02
NECEvent2014_8_4_scaffold_2605 178_004_scaffold_2605
Species: Streptococcus sp. HSISS3 (66.67%)
3 2519 bp 41.33 4.23 88.13
NECEvent2014_8_4_scaffold_2838 178_004_scaffold_2838
Genus: Streptococcus (100%)
5 2265 bp 39.47 4.24 90.20
NECEvent2014_8_4_scaffold_2387 178_004_scaffold_2387
Species: Streptococcus mitis (50%)
4 2751 bp 47.26 4.25 101.53
NECEvent2014_8_4_scaffold_4287 178_004_scaffold_4287
Species: Streptococcus mitis (100%)
1 1412 bp 42.85 4.25 84.77
NECEvent2014_8_4_scaffold_4947 178_004_scaffold_4947
Species: Streptococcus mitis (100%)
1 1195 bp 38.58 4.27 89.12
Displaying items 51-100 of 486 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.