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NECEvent2014_8_6_scaffold_187_26

Organism: NECEvent2014_8_6_Escherichia_coli_51_30_partial

partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 18686..18898

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspF n=323 Tax=Escherichia RepID=CSPF_ECOL6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 141
  • Evalue 4.30e-31
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 70.0
  • Bit_score: 139
  • Evalue 2.70e-31
Cold shock-like protein CspF {ECO:0000313|EMBL:AFH11345.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 70.0
  • Bit_score: 139
  • Evalue 1.30e-30

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCGTATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTTGCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA
PROTEIN sequence
Length: 71
LSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS*