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NECEvent2014_8_6_scaffold_187

Alias: 178_006_scaffold_187

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_6_scaffold_187_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Phage minor tail family protein n=1 Tax=Escherichia coli DEC14D RepID=H5P1I4_ECOLX
putative minor tail protein
Putative minor tail protein {ECO:0000313|EMBL:BAI29418.1}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_8_6_scaffold_187_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(285..2846)
DNA (2562bp) protein (854aa)
Lambda family phage tail tape measure protein n=1 Tax=Escherichia coli UMEA 3805-1 RepID=T9T7S4_ECOLX rbh
Lambda family phage tail tape measure protein {ECO:0000313|EMBL:EQX67635.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
phage tail tape measure protein, lambda family
NECEvent2014_8_6_scaffold_187_3
Enterobacteria phage lambda, Lambdalikevirus, Caudovirales, Viruses

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comp(2839..3273)
DNA (435bp) protein (145aa)
Minor tail protein T n=447 Tax=root RepID=VMTT_LAMBD
Tail assembly protein GT; Gene product GT; Short=gpGT;; Minor tail protein GT; TaxID=10710 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Lambdalikevirus.;" source="Enterob
T; tail component
NECEvent2014_8_6_scaffold_187_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3255..3677)
DNA (423bp) protein (141aa)
Minor tail protein G n=130 Tax=root RepID=VMTG_LAMBD
minor tail protein
Phage minor tail protein G {ECO:0000313|EMBL:ELE58180.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_8_6_scaffold_187_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3693..4433)
DNA (741bp) protein (247aa)
Major tail protein V n=45 Tax=root RepID=VMTV_LAMBD rbh
Ig domain-containing protein group 2 domain-containing protein
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:ESC89305.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_8_6_scaffold_187_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4441..4836)
DNA (396bp) protein (132aa)
Minor tail protein U n=367 Tax=root RepID=VMTU_LAMBD
minor tail U
Phage minor tail protein U {ECO:0000313|EMBL:EGI22869.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_187_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4833..5411)
DNA (579bp) protein (193aa)
Prophage minor tail Z family protein n=5 Tax=Shigella sonnei RepID=I6E9Z1_SHISO rbh
Z; enterobacteria phage lambda, tail component
Prophage minor tail protein Z {ECO:0000313|EMBL:ESA63918.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_6_scaffold_187_8
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5423..5776)
DNA (354bp) protein (118aa)
Phage tail attachment protein (Minor capsid protein) n=57 Tax=Enterobacteriaceae RepID=D3GSJ6_ECO44
putative head-tail joining protein of prophage
Phage Head-Tail Attachment family protein {ECO:0000313|EMBL:EJL15984.1}; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source=
NECEvent2014_8_6_scaffold_187_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5788..6186)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=E1JEZ1_ECOLX
DNA packaging protein
DNA packaging protein from bacteriophage origin {ECO:0000313|EMBL:EHX35423.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_8_6_scaffold_187_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6228..7253)
DNA (1026bp) protein (342aa)
Major head protein n=1 Tax=Escherichia coli UMEA 3805-1 RepID=T9T631_ECOLX rbh
major capsid protein E
Phage major capsid protein E {ECO:0000313|EMBL:EGI22865.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_187_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7309..7641)
DNA (333bp) protein (111aa)
Bacteriophage lambda head decoration protein D n=7 Tax=Escherichia coli RepID=F4SWL8_ECOLX
Head decoration protein
Bacteriophage lambda head decoration protein D {ECO:0000313|EMBL:AFH11329.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_8_6_scaffold_187_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7651..8970)
DNA (1320bp) protein (440aa)
Minor capsid protein n=9 Tax=Escherichia coli RepID=E0IX20_ECOLW rbh
Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin rbh
Minor capsid protein {ECO:0000313|EMBL:AFH11330.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
NECEvent2014_8_6_scaffold_187_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8951..10552)
DNA (1602bp) protein (534aa)
Lambda family phage portal protein n=19 Tax=Escherichia coli RepID=E0IX19_ECOLW rbh
Phage portal protein, lambda family {ECO:0000313|EMBL:ADX50854.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
Portal protein; minor capsid protein [Contains: Protein B*] from bacteriophage origin
NECEvent2014_8_6_scaffold_187_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10549..10755)
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W n=703 Tax=root RepID=VHTJ_ECOL6
Lambda prophage-derived head-to-tail joining protein W
GpW {ECO:0000313|EMBL:EGI47277.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
NECEvent2014_8_6_scaffold_187_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10752..12677)
DNA (1926bp) protein (642aa)
Large terminase n=10 Tax=Escherichia coli RepID=L3EXT7_ECOLX rbh
Phage terminase large subunit {ECO:0000313|EMBL:ESC89315.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
terminase large subunit
NECEvent2014_8_6_scaffold_187_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12652..13197)
DNA (546bp) protein (182aa)
Phage DNA packaging protein n=147 Tax=Enterobacteriaceae RepID=B6IBL1_ECOSE rbh
phage DNA packaging protein
Terminase small subunit {ECO:0000313|EMBL:ENB29993.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_187_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13877..14287
DNA (411bp) protein (137aa)
Uncharacterized protein YdfO n=101 Tax=Escherichia RepID=YDFO_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM61306.1}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_187_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14439..14612)
DNA (174bp) protein (58aa)
Protein GnsB n=247 Tax=Escherichia RepID=GNSB_ECOLI
hypothetical protein
GnsA/GnsB family protein {ECO:0000313|EMBL:KDZ16185.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_8_6_scaffold_187_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15286..15498)
DNA (213bp) protein (71aa)
Cold shock-like protein CspI n=449 Tax=Enterobacteriaceae RepID=CSPI_ECOL6
cold-shock protein
Cold shock-like protein CspG {ECO:0000313|EMBL:END92468.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_8_6_scaffold_187_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15861..16358)
DNA (498bp) protein (166aa)
Uncharacterized protein RzpQ n=322 Tax=Escherichia RepID=RZPQ_ECOLI rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL41621.1}; Flags: Fragment;; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
hypothetical protein
NECEvent2014_8_6_scaffold_187_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16355..16888)
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
Probable lysozyme from lambdoid prophage Qin n=299 Tax=Escherichia RepID=LYSQ_ECOLI rbh
ydfQ; putative lysozyme from lambdoid prophage Qin rbh
NECEvent2014_8_6_scaffold_187_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16885..17196)
DNA (312bp) protein (104aa)
Uncharacterized protein YdfR n=132 Tax=Escherichia RepID=YDFR_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV78810.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.
NECEvent2014_8_6_scaffold_187_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17201..17407)
DNA (207bp) protein (69aa)
Lysis protein S homolog from lambdoid prophage Qin n=353 Tax=Escherichia RepID=ESSQ_ECOLI
Lysis S family protein
Lysis S family protein {ECO:0000313|EMBL:END92472.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_8_6_scaffold_187_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17449..17568
DNA (120bp) protein (40aa)
Uncharacterized protein n=146 Tax=Escherichia RepID=E0IX08_ECOLW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK36558.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_187_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18170..18385)
DNA (216bp) protein (72aa)
Cold shock-like protein CspB n=304 Tax=Escherichia coli RepID=CSPB_ECOLI
Qin prophage; cold shock protein
Cold shock protein CspA {ECO:0000313|EMBL:END92474.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_8_6_scaffold_187_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18686..18898
DNA (213bp) protein (71aa)
Cold shock-like protein CspF n=323 Tax=Escherichia RepID=CSPF_ECOL6
cold-shock protein
Cold shock-like protein CspF {ECO:0000313|EMBL:AFH11345.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_8_6_scaffold_187_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19320..20072)
DNA (753bp) protein (251aa)
Phage antitermination protein n=1 Tax=Escherichia coli HVH 221 (4-3136817) RepID=T8DFW1_ECOLX rbh
quuQ; Qin prophage; antitermination protein Q rbh
Phage antitermination protein {ECO:0000313|EMBL:EOV62952.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_8_6_scaffold_187_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20086..21135)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=111 Tax=Escherichia coli RepID=B7LZU5_ECO8A rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGI11166.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
ydfU; Qin prophage protein
Displaying 28 items

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