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PLM3_127_b2_sep16_Rokubacteria_69_9

PLM3_127cm_b2_sep2016_Bacteria_69_9
In projects: PLM3_127cm_b2_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 401-450 of 522 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3_127_b2_sep16_scaffold_4272
Domain: Bacteria (85.71%)
7 9255 bp 68.21 7.55 89.66
PLM3_127_b2_sep16_scaffold_8464
Domain: Bacteria (85.71%)
7 6902 bp 67.44 7.54 82.72
PLM3_127_b2_sep16_scaffold_19533
Domain: Bacteria (85.71%)
7 5268 bp 67.65 7.49 88.55
PLM3_127_b2_sep16_scaffold_8236
Domain: Bacteria (80%)
5 8031 bp 72.25 7.47 92.27
PLM3_127_b2_sep16_scaffold_16078
Domain: Bacteria (100%)
5 4352 bp 70.06 7.44 86.93
PLM3_127_b2_sep16_scaffold_4217
Domain: Bacteria (71.43%)
14 12609 bp 68.15 7.44 76.52
PLM3_127_b2_sep16_scaffold_33635
Species: RBG_16_Actinobacteria_68_12_curated (66.67%)
6 5469 bp 68.29 7.43 87.88
PLM3_127_b2_sep16_scaffold_22411
Phylum: Proteobacteria (60%)
5 4672 bp 68.13 7.42 86.49
PLM3_127_b2_sep16_scaffold_25469
Species: GWC2_Rokubacteria_70_16_curated (50%)
4 3334 bp 68.66 7.42 95.38
PLM3_127_b2_sep16_scaffold_8663
Domain: Bacteria (92.31%)
13 10235 bp 69.50 7.40 87.29
PLM3_127_b2_sep16_scaffold_10965
Phylum: Proteobacteria (50%)
6 5423 bp 68.19 7.39 97.64
PLM3_127_b2_sep16_scaffold_17974
Phylum: Rokubacteria (50%)
10 8632 bp 67.96 7.39 82.12
PLM3_127_b2_sep16_scaffold_7512
Domain: Bacteria (71.43%)
7 7146 bp 69.07 7.39 88.04
PLM3_127_b2_sep16_scaffold_13277
Domain: Bacteria (81.82%)
11 9467 bp 68.28 7.38 94.69
PLM3_127_b2_sep16_scaffold_12831
Phylum: Proteobacteria (70%)
10 9531 bp 66.59 7.35 79.82
PLM3_127_b2_sep16_scaffold_7193
Phylum: Proteobacteria (60%)
5 8798 bp 66.37 7.35 91.18
PLM3_127_b2_sep16_scaffold_21005
Domain: Bacteria (80%)
5 3728 bp 69.34 7.32 82.97
PLM3_127_b2_sep16_scaffold_9782
Species: GWA2_Rokubacteria_73_35_curated (60%)
5 5796 bp 70.53 7.32 94.41
PLM3_127_b2_sep16_scaffold_91247
Domain: Bacteria (100%)
3 3115 bp 68.76 7.32 94.86
PLM3_127_b2_sep16_scaffold_36029
Domain: Bacteria (100%)
5 4311 bp 67.90 7.31 86.22
PLM3_127_b2_sep16_scaffold_15135
Species: R_Rokubacteria_73_56 (50%)
6 4506 bp 69.57 7.29 98.93
PLM3_127_b2_sep16_scaffold_61046
Phylum: Proteobacteria (60%)
5 3132 bp 71.04 7.28 80.56
PLM3_127_b2_sep16_scaffold_36944 6 5645 bp 71.32 7.25 73.34
PLM3_127_b2_sep16_scaffold_8981
Domain: Bacteria (70%)
10 10550 bp 68.53 7.22 92.70
PLM3_127_b2_sep16_scaffold_7170
Domain: Bacteria (62.5%)
8 6914 bp 69.74 7.22 80.32
PLM3_127_b2_sep16_scaffold_87320
Domain: Bacteria (75%)
4 3138 bp 69.92 7.22 88.62
PLM3_127_b2_sep16_scaffold_11210
Domain: Bacteria (100%)
5 8329 bp 70.21 7.19 85.11
PLM3_127_b2_sep16_scaffold_12111
Species: R_Rokubacteria_73_56 (60%)
5 5124 bp 70.55 7.14 90.69
PLM3_127_b2_sep16_scaffold_6435
Domain: Bacteria (66.67%)
6 7324 bp 69.33 7.13 93.10
PLM3_127_b2_sep16_scaffold_9035
Phylum: Proteobacteria (66.67%)
6 6067 bp 67.30 7.12 74.77
PLM3_127_b2_sep16_scaffold_89207
Domain: Bacteria (100%)
4 3126 bp 68.55 7.10 91.07
PLM3_127_b2_sep16_scaffold_61850
Domain: Bacteria (80%)
5 3348 bp 66.22 7.08 78.58
PLM3_127_b2_sep16_scaffold_7552
Phylum: Rokubacteria (71.43%)
7 7368 bp 68.25 7.06 90.59
PLM3_127_b2_sep16_scaffold_26548
Species: RBG_16_Spirochaete_67_19_curated (50%)
4 3260 bp 70.74 7.04 95.25
PLM3_127_b2_sep16_scaffold_15550
Phylum: Rokubacteria (87.5%)
8 6019 bp 70.49 7.03 96.10
PLM3_127_b2_sep16_scaffold_5641
Domain: Bacteria (84.62%)
26 26942 bp 69.76 7.01 81.41
PLM3_127_b2_sep16_scaffold_7088
Phylum: Acidobacteria (71.43%)
7 6955 bp 71.91 6.99 97.05
PLM3_127_b2_sep16_scaffold_13175
Species: R_Rokubacteria_73_56 (50%)
4 4870 bp 70.84 6.99 98.44
PLM3_127_b2_sep16_scaffold_22825
Species: CSP1_6_Rokubacteria (66.67%)
3 4589 bp 69.49 6.99 89.30
PLM3_127_b2_sep16_scaffold_35206
Domain: Bacteria (90%)
10 5212 bp 67.00 6.94 87.09
PLM3_127_b2_sep16_scaffold_27524
Domain: Bacteria (75%)
8 6953 bp 68.79 6.93 82.50
PLM3_127_b2_sep16_scaffold_11199
Domain: Bacteria (100%)
6 5901 bp 69.95 6.91 96.14
PLM3_127_b2_sep16_scaffold_29536
Domain: Bacteria (50%)
6 3389 bp 66.18 6.90 86.57
PLM3_127_b2_sep16_scaffold_24246
Domain: Bacteria (85.71%)
7 4803 bp 69.08 6.90 79.76
PLM3_127_b2_sep16_scaffold_11339
Phylum: Rokubacteria (69.23%)
13 9161 bp 68.81 6.88 81.61
PLM3_127_b2_sep16_scaffold_35756
Domain: Bacteria (60%)
5 5456 bp 68.00 6.85 82.86
PLM3_127_b2_sep16_scaffold_19699
Phylum: Rokubacteria (60%)
5 6156 bp 66.93 6.85 80.95
PLM3_127_b2_sep16_scaffold_16440
Class: Alphaproteobacteria (57.14%)
7 6260 bp 68.71 6.83 81.28
PLM3_127_b2_sep16_scaffold_11239
Phylum: Proteobacteria (54.55%)
11 8827 bp 70.37 6.81 87.96
PLM3_127_b2_sep16_scaffold_15889
Phylum: Rokubacteria (75%)
8 9156 bp 69.56 6.80 95.28
Displaying items 401-450 of 522 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.