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PLM4_5_b1_sep16_scaffold_32050

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_32050_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..357)
DNA (357bp) protein (119aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tRNA pseudouridine synthase A Tax=Pedosphaera parvula Ellin514 RepID=B9XDA1_9BACT
truA; tRNA pseudouridine synthase A
PLM4_5_b1_sep16_scaffold_32050_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(366..776)
DNA (411bp) protein (137aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Putative Holliday junction resolvase Tax=Pedosphaera parvula Ellin514 RepID=B9XDA0_9BACT
rnhD; RNase H-like ribonuclease
PLM4_5_b1_sep16_scaffold_32050_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(801..1262)
DNA (462bp) protein (154aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Pedosphaera parvula Ellin514 RepID=B9XD98_9BACT
glutamate-1-semialdehyde-2,1-aminomutase
PLM4_5_b1_sep16_scaffold_32050_4
unknown

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1760..1918
DNA (159bp) protein (53aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_32050_5
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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1921..2121
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_5_b1_sep16_scaffold_32050_6
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2805..3746
DNA (942bp) protein (314aa)
Alpha-mannosidase Tax=Pedobacter sp. BAL39 RepID=A6ECR4_9SPHI
Alpha-mannosidase {ECO:0000313|EMBL:EDM36970.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
glycoside hydrolase
PLM4_5_b1_sep16_scaffold_32050_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3766..5331
DNA (1566bp) protein (522aa)
Glycosyl hydrolase 38 domain protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM42_CHIPD
glycoside hydrolase
Glycosyl hydrolase 38 domain protein {ECO:0000313|EMBL:ACU62256.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM4_5_b1_sep16_scaffold_32050_8
unknown

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5415..6110
DNA (696bp) protein (232aa)

This feature has no annotations

Displaying 8 items

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