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QH_2_Halobacteriales_65_14

In projects: QH_2  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 51-100 of 113 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_721
Class: Halobacteria (80.56%)
36 39427 bp 62.61 13.53 84.63
qh_2_scaffold_1645
Order: Halobacteriales (71.43%)
7 6398 bp 65.75 13.49 95.37
qh_2_scaffold_972
Order: Halobacteriales (51.22%)
41 34034 bp 66.36 13.48 90.27
qh_2_scaffold_955
Order: Halobacteriales (54.55%)
33 39160 bp 65.85 13.48 84.31
qh_2_scaffold_486
Order: Halobacteriales (74.19%)
31 32808 bp 64.49 13.47 87.65
qh_2_scaffold_1396
Order: Halobacteriales (63.64%)
11 8025 bp 65.13 13.47 84.71
qh_2_scaffold_2500
Order: Halobacteriales (57.14%)
14 7311 bp 62.99 13.46 80.26
qh_2_scaffold_1282
Order: Halobacteriales (50%)
12 16007 bp 63.25 13.43 86.46
qh_2_scaffold_1877
Order: Halobacteriales (50%)
6 4910 bp 65.64 13.42 84.99
qh_2_scaffold_239
Class: Halobacteria (76.47%)
17 15696 bp 63.23 13.36 86.68
qh_2_scaffold_794
Order: Halobacteriales (60%)
20 18774 bp 65.11 13.32 87.90
qh_2_scaffold_412
Order: Halobacteriales (64.29%)
14 13672 bp 65.13 13.31 91.83
qh_2_scaffold_248
Order: Halobacteriales (66.67%)
60 57877 bp 64.35 13.29 82.94
qh_2_scaffold_2697
Order: Natrialbales (60%)
10 7577 bp 62.49 13.28 83.82
qh_2_scaffold_463
Order: Halobacteriales (66.67%)
12 10360 bp 64.12 13.26 79.81
qh_2_scaffold_651
Order: Halobacteriales (75%)
24 21264 bp 64.44 13.20 81.94
qh_2_scaffold_2612
Order: Halobacteriales (50%)
8 6247 bp 66.77 13.19 88.51
qh_2_scaffold_901
Order: Halobacteriales (59.09%)
22 19519 bp 63.45 13.18 87.68
qh_2_scaffold_324
Class: Halobacteria (78.57%)
14 12263 bp 64.45 13.16 93.67
qh_2_scaffold_328
Order: Halobacteriales (61.54%)
26 23320 bp 63.37 13.14 84.84
qh_2_scaffold_1426
Order: Halobacteriales (68.42%)
19 19761 bp 64.50 13.12 85.94
qh_2_scaffold_1014
Order: Halobacteriales (50%)
28 23361 bp 65.77 13.11 87.83
qh_2_scaffold_1874
Order: Halobacteriales (84.62%)
13 7342 bp 64.93 13.04 79.56
qh_2_scaffold_2818
Order: Halobacteriales (54.55%)
11 9427 bp 66.57 13.01 91.72
qh_2_scaffold_390
Class: Halobacteria (73.68%)
19 18437 bp 66.25 12.97 84.14
qh_2_scaffold_1468
Order: Halobacteriales (83.33%)
6 8722 bp 64.93 12.86 91.32
qh_2_scaffold_931
Order: Halobacteriales (57.14%)
28 22829 bp 65.22 12.78 93.47
qh_2_scaffold_348
Class: Halobacteria (71.43%)
14 12014 bp 64.57 12.74 81.11
qh_2_scaffold_1323
Class: Halobacteria (85.71%)
7 5864 bp 65.86 12.64 84.62
qh_2_scaffold_650
Class: Halobacteria (68.18%)
22 15570 bp 65.87 12.59 77.93
qh_2_scaffold_5304
Class: Halobacteria (66.67%)
3 5150 bp 66.16 12.58 93.44
qh_2_scaffold_1880
Class: Halobacteria (71.43%)
7 8338 bp 65.02 12.58 90.02
qh_2_scaffold_1424
Class: Halobacteria (80%)
5 12861 bp 64.71 12.57 96.57
qh_2_scaffold_846
Class: Halobacteria (50%)
10 7509 bp 63.24 12.56 75.54
qh_2_scaffold_281
Order: Halobacteriales (85.71%)
21 19288 bp 63.46 12.56 91.33
qh_2_scaffold_167
Order: Halobacteriales (73.08%)
26 23102 bp 62.26 12.45 82.29
qh_2_scaffold_1027
Order: Halobacteriales (61.54%)
13 12323 bp 65.06 12.42 86.18
qh_2_scaffold_425
Order: Halobacteriales (50%)
36 33503 bp 63.46 12.39 86.53
qh_2_scaffold_365
Order: Halobacteriales (76.92%)
26 22313 bp 64.15 12.36 89.64
qh_2_scaffold_939
Order: Halobacteriales (85.71%)
7 7101 bp 63.32 12.35 82.38
qh_2_scaffold_396
Order: Halobacteriales (70.37%)
27 26563 bp 64.27 12.35 88.42
qh_2_scaffold_482
Class: Halobacteria (78.95%)
19 13948 bp 62.71 12.29 83.32
qh_2_scaffold_397
Class: Halobacteria (86.67%)
15 11126 bp 62.88 12.27 84.94
qh_2_scaffold_2632
Order: Halobacteriales (100%)
7 7749 bp 65.21 12.16 90.98
qh_2_scaffold_5944
Order: Halobacteriales (87.5%)
8 5092 bp 62.69 12.14 75.41
qh_2_scaffold_4705
Class: Halobacteria (71.43%)
7 4101 bp 66.28 12.14 75.15
qh_2_scaffold_1558
Order: Halobacteriales (66.67%)
9 8318 bp 66.41 12.12 85.95
qh_2_scaffold_3231
Class: Halobacteria (60%)
5 3631 bp 62.49 12.04 81.22
qh_2_scaffold_381
Order: Natrialbales (57.14%)
7 11351 bp 65.48 12.03 93.48
qh_2_scaffold_286
Order: Halobacteriales (67.65%)
34 29182 bp 63.09 12.03 89.03
Displaying items 51-100 of 113 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.