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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 251-300 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_625 15 15123 bp 53.28 19.15 59.63
qs_1_scaffold_226
Phylum: Chlorophyta (53.33%)
15 24758 bp 56.31 21.58 82.83
qs_1_scaffold_1938 15 18531 bp 55.79 21.10 75.64
qs_1_scaffold_810 15 13112 bp 53.13 17.69 76.81
qs_1_scaffold_603 15 15330 bp 56.33 20.48 76.30
qs_1_scaffold_1252 15 14645 bp 55.05 21.66 67.62
qs_1_scaffold_632 15 14983 bp 55.78 20.90 68.52
qs_1_scaffold_2659 15 8374 bp 61.13 18.90 80.43
qs_1_scaffold_1277 15 9989 bp 57.24 18.55 83.19
qs_1_scaffold_424
Domain: Viridiplantae (53.33%)
15 18721 bp 57.89 20.38 78.01
qs_1_scaffold_2983 15 8417 bp 55.93 20.02 63.73
qs_1_scaffold_1993 14 12569 bp 53.93 20.57 72.51
qs_1_scaffold_820
Phylum: Chlorophyta (50%)
14 12971 bp 56.10 20.60 80.26
qs_1_scaffold_3378 14 11592 bp 55.20 21.20 75.93
qs_1_scaffold_849 14 12746 bp 53.95 22.08 73.06
qs_1_scaffold_1149 14 17677 bp 58.86 20.76 80.38
qs_1_scaffold_443 14 30273 bp 54.80 22.46 81.26
qs_1_scaffold_1450 14 14635 bp 57.23 20.06 82.00
qs_1_scaffold_829 14 13819 bp 53.90 20.38 66.00
qs_1_scaffold_1128 14 18240 bp 56.84 21.24 80.25
qs_1_scaffold_1336 14 13481 bp 51.82 19.73 61.29
qs_1_scaffold_1060 14 11665 bp 56.46 20.28 71.52
qs_1_scaffold_251
Domain: Viridiplantae (57.14%)
14 23714 bp 56.54 21.03 83.19
qs_1_scaffold_407
Domain: Viridiplantae (50%)
14 19079 bp 55.78 21.26 81.31
qs_1_scaffold_2442 14 15898 bp 55.14 20.61 68.95
qs_1_scaffold_1085 14 11573 bp 54.61 21.41 70.12
qs_1_scaffold_899 14 20675 bp 56.24 21.73 70.98
qs_1_scaffold_3237 14 10613 bp 53.93 18.95 65.50
qs_1_scaffold_2058 14 11921 bp 56.26 20.18 86.02
qs_1_scaffold_1645 14 10195 bp 60.13 30.66 79.45
qs_1_scaffold_680
Domain: Viridiplantae (50%)
14 18683 bp 55.60 21.29 86.04
qs_1_scaffold_1971 13 7510 bp 57.44 20.65 80.57
qs_1_scaffold_532 13 16529 bp 54.90 21.22 88.64
qs_1_scaffold_1442 13 12908 bp 55.35 21.47 75.35
qs_1_scaffold_775
Domain: Viridiplantae (53.85%)
13 19373 bp 56.13 20.77 84.88
qs_1_scaffold_2940 13 11360 bp 57.87 21.85 82.63
qs_1_scaffold_571 13 19967 bp 55.08 20.31 75.24
qs_1_scaffold_2066 13 7294 bp 53.93 22.57 78.19
qs_1_scaffold_846 13 12772 bp 54.81 20.24 78.86
qs_1_scaffold_685 13 14261 bp 53.99 20.03 78.91
qs_1_scaffold_1145 13 10621 bp 52.83 20.53 72.62
qs_1_scaffold_1514 13 11871 bp 54.34 22.40 75.18
qs_1_scaffold_2138 13 8786 bp 56.12 20.98 79.73
qs_1_scaffold_3176 13 11333 bp 56.05 21.56 73.62
qs_1_scaffold_893 13 12397 bp 59.09 22.08 79.47
qs_1_scaffold_2694 13 15263 bp 53.33 21.94 71.82
qs_1_scaffold_4300 13 9368 bp 54.33 19.57 70.14
qs_1_scaffold_965 13 12749 bp 56.27 20.54 87.18
qs_1_scaffold_1198 13 11755 bp 53.60 23.48 68.14
qs_1_scaffold_2006 13 7444 bp 56.93 19.33 74.56
Displaying items 251-300 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.