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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 301-350 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_648 13 14727 bp 55.64 21.61 87.82
qs_1_scaffold_627 13 15113 bp 56.98 20.44 75.85
qs_1_scaffold_563 13 18915 bp 54.24 21.77 84.31
qs_1_scaffold_925 13 13248 bp 55.66 19.58 83.45
qs_1_scaffold_1182 13 14610 bp 62.80 19.01 87.39
qs_1_scaffold_608 13 15296 bp 54.60 21.14 80.16
qs_1_scaffold_1484 13 14279 bp 55.90 20.29 81.94
qs_1_scaffold_2106
Phylum: Chlorophyta (53.85%)
13 14075 bp 58.66 20.42 82.53
qs_1_scaffold_1094 12 10947 bp 56.09 21.70 66.32
qs_1_scaffold_1647
Domain: Viridiplantae (58.33%)
12 16603 bp 56.12 20.36 75.71
qs_1_scaffold_1532 12 8891 bp 56.60 19.50 75.72
qs_1_scaffold_658 12 16905 bp 57.07 20.71 87.67
qs_1_scaffold_1003 12 11512 bp 56.81 20.27 79.82
qs_1_scaffold_1787 12 7983 bp 55.13 20.47 72.27
qs_1_scaffold_3279 12 9441 bp 54.72 19.22 62.69
qs_1_scaffold_2249 12 13259 bp 55.24 20.61 81.75
qs_1_scaffold_533
Domain: Viridiplantae (50%)
12 20491 bp 55.55 22.26 69.25
qs_1_scaffold_348
Phylum: Chlorophyta (50%)
12 20696 bp 55.63 20.54 80.06
qs_1_scaffold_1628 12 10779 bp 61.93 17.65 71.28
qs_1_scaffold_2735 12 13877 bp 58.42 19.27 75.97
qs_1_scaffold_1169 12 10497 bp 55.84 20.07 75.08
qs_1_scaffold_618 12 15186 bp 57.92 20.35 79.45
qs_1_scaffold_1401 12 9442 bp 54.96 21.45 71.74
qs_1_scaffold_504
Phylum: Chlorophyta (50%)
12 16931 bp 55.44 21.53 79.98
qs_1_scaffold_4883 12 7241 bp 54.92 18.82 71.05
qs_1_scaffold_738 12 15441 bp 56.48 20.33 86.42
qs_1_scaffold_2788 12 10248 bp 50.69 21.19 55.94
qs_1_scaffold_4196 12 5749 bp 55.61 20.59 72.43
qs_1_scaffold_420 12 19977 bp 53.85 21.34 74.20
qs_1_scaffold_626 12 15116 bp 54.42 22.08 78.00
qs_1_scaffold_1063 12 13380 bp 52.64 22.22 86.97
qs_1_scaffold_1595 12 14938 bp 55.28 20.56 73.52
qs_1_scaffold_2446 12 7354 bp 54.03 21.65 63.03
qs_1_scaffold_1112 12 17846 bp 56.14 20.94 88.86
qs_1_scaffold_1205 12 10344 bp 55.21 21.69 74.83
qs_1_scaffold_3654
Domain: Viridiplantae (58.33%)
12 13809 bp 55.03 19.73 64.15
qs_1_scaffold_1367 12 12398 bp 56.13 19.77 73.12
qs_1_scaffold_1943
Domain: Viridiplantae (50%)
12 13752 bp 54.29 20.96 59.47
qs_1_scaffold_3557 12 10829 bp 54.96 20.82 72.00
qs_1_scaffold_1026 11 11359 bp 58.43 20.86 73.82
qs_1_scaffold_776 11 14310 bp 54.28 20.19 72.52
qs_1_scaffold_1651 11 8419 bp 57.12 21.78 72.73
qs_1_scaffold_3011 11 11830 bp 59.54 20.64 75.75
qs_1_scaffold_1030 11 11336 bp 53.47 21.24 76.59
qs_1_scaffold_485
Domain: Viridiplantae (54.55%)
11 17293 bp 55.98 19.92 70.97
qs_1_scaffold_1837 11 11987 bp 56.97 21.64 72.65
qs_1_scaffold_2575 11 13189 bp 52.68 21.13 76.27
qs_1_scaffold_6182 11 5947 bp 57.04 18.43 73.40
qs_1_scaffold_1655 11 13670 bp 56.94 21.42 67.11
qs_1_scaffold_2715
Phylum: Chlorophyta (54.55%)
11 12676 bp 56.32 21.15 81.72
Displaying items 301-350 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.