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Omnitrophica WOR_2 bacterium RBG_13_44_8b

RBG_13_unknown_42_1
In projects: RBG_13  |  2500-genomes  |  2500-curated-genomes  |  2500-curated-genomes-non-redundant  |  rifle_organic_carbon  |  rifle-organic-carbon-non-redundant  |  ggdb

Consensus taxonomy:

Metagenomic Context

Parent: RBG_13_UNK Manually curated genome Candidate phylum (ggDB)

Properties

Avg. coverage: 1.00 Longest contig: 48.89 Kbp Bin length: 1.38 Mbp GC content: 41.93 %
Contigs count: 113 Features count: 1501 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 42 / 55 MC: 1 BSCG 40 / 51 ASCG 7 / 38 MC: 1
Displaying items 1-50 of 113 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RBG_13_OP3_44_8_RBG_13_scaffold_39557 7 5451 bp 42.98 1.00 80.35
RBG_13_OP3_44_8_RBG_13_scaffold_4063 16 16557 bp 43.78 1.00 83.40
RBG_13_OP3_44_8_RBG_13_scaffold_10737
Domain: Bacteria (57.14%)
7 6786 bp 39.63 1.00 61.14
RBG_13_OP3_44_8_RBG_13_scaffold_4283 14 13294 bp 40.68 1.00 65.76
RBG_13_OP3_44_8_RBG_13_scaffold_2706 30 23270 bp 42.06 1.00 83.93
RBG_13_OP3_44_8_RBG_13_scaffold_11382 10 6941 bp 36.61 1.00 62.50
RBG_13_OP3_44_8_RBG_13_scaffold_6022 11 13365 bp 42.50 1.00 89.49
RBG_13_OP3_44_8_RBG_13_scaffold_13430 7 6324 bp 40.53 1.00 59.82
RBG_13_OP3_44_8_RBG_13_scaffold_1776 21 19753 bp 44.95 1.00 84.69
RBG_13_OP3_44_8_RBG_13_scaffold_48573 4 5551 bp 30.63 1.00 41.29
RBG_13_OP3_44_8_RBG_13_scaffold_6512 8 8301 bp 41.34 1.00 59.85
RBG_13_OP3_44_8_RBG_13_scaffold_41093 7 7000 bp 35.74 1.00 48.77
RBG_13_OP3_44_8_RBG_13_scaffold_8364 7 7063 bp 40.07 1.00 88.31
RBG_13_OP3_44_8_RBG_13_scaffold_34632 10 7726 bp 37.73 1.00 71.72
RBG_13_OP3_44_8_RBG_13_scaffold_2476 18 13724 bp 43.71 1.00 87.74
RBG_13_OP3_44_8_RBG_13_scaffold_3481 13 13347 bp 41.38 1.00 63.03
RBG_13_OP3_44_8_RBG_13_scaffold_2041 15 16376 bp 39.80 1.00 92.77
RBG_13_OP3_44_8_RBG_13_scaffold_5242 11 12037 bp 42.85 1.00 81.62
RBG_13_OP3_44_8_RBG_13_scaffold_16235 10 8480 bp 42.55 1.00 92.19
RBG_13_OP3_44_8_RBG_13_scaffold_7261 31 27342 bp 42.28 1.00 72.34
RBG_13_OP3_44_8_RBG_13_scaffold_31158 7 5520 bp 38.39 1.00 67.93
RBG_13_OP3_44_8_RBG_13_scaffold_2189 18 19132 bp 43.31 1.00 87.43
RBG_13_OP3_44_8_RBG_13_scaffold_9517 10 10183 bp 44.23 1.00 52.82
RBG_13_OP3_44_8_RBG_13_scaffold_15029 7 6833 bp 42.09 1.00 70.64
RBG_13_OP3_44_8_RBG_13_scaffold_13023 10 15486 bp 39.66 1.00 71.48
RBG_13_OP3_44_8_RBG_13_scaffold_4127 12 10737 bp 42.76 1.00 89.63
RBG_13_OP3_44_8_RBG_13_scaffold_45690 7 5195 bp 35.53 1.00 49.37
RBG_13_OP3_44_8_RBG_13_scaffold_5195 13 11600 bp 41.62 1.00 91.91
RBG_13_OP3_44_8_RBG_13_scaffold_16561 8 5508 bp 44.17 1.00 83.22
RBG_13_OP3_44_8_RBG_13_scaffold_8240 20 17251 bp 42.98 1.00 91.39
RBG_13_OP3_44_8_RBG_13_scaffold_7824 15 13895 bp 41.35 1.00 76.37
RBG_13_OP3_44_8_RBG_13_scaffold_4931 35 33356 bp 43.28 1.00 75.39
RBG_13_OP3_44_8_RBG_13_scaffold_19786 4 5036 bp 43.65 1.00 80.72
RBG_13_OP3_44_8_RBG_13_scaffold_2273 49 48892 bp 42.73 1.00 78.87
RBG_13_OP3_44_8_RBG_13_scaffold_1510 31 30963 bp 44.95 1.00 81.91
RBG_13_OP3_44_8_RBG_13_scaffold_10674 11 6945 bp 45.00 1.00 95.72
RBG_13_OP3_44_8_RBG_13_scaffold_38695 7 6022 bp 39.06 1.00 62.62
RBG_13_OP3_44_8_RBG_13_scaffold_9320 8 7262 bp 46.30 1.00 91.34
RBG_13_OP3_44_8_RBG_13_scaffold_17174 6 5404 bp 41.62 1.00 72.34
RBG_13_OP3_44_8_RBG_13_scaffold_6161 11 9465 bp 41.76 1.00 80.98
RBG_13_OP3_44_8_RBG_13_scaffold_2426 14 14426 bp 43.44 1.00 94.93
RBG_13_OP3_44_8_RBG_13_scaffold_25941 7 6134 bp 38.64 1.00 56.83
RBG_13_OP3_44_8_RBG_13_scaffold_45452 7 9328 bp 36.26 1.00 61.72
RBG_13_OP3_44_8_RBG_13_scaffold_24629 6 4951 bp 39.91 1.00 86.47
RBG_13_OP3_44_8_RBG_13_scaffold_5847 10 10007 bp 38.82 1.00 81.18
RBG_13_OP3_44_8_RBG_13_scaffold_37997 9 7856 bp 38.96 1.00 52.09
RBG_13_OP3_44_8_RBG_13_scaffold_3098 17 16830 bp 42.12 1.00 75.28
RBG_13_OP3_44_8_RBG_13_scaffold_2430 9 13188 bp 45.42 1.00 94.13
RBG_13_OP3_44_8_RBG_13_scaffold_14853 7 5818 bp 44.72 1.00 100.60
RBG_13_OP3_44_8_RBG_13_scaffold_16355 11 9191 bp 42.38 1.00 57.06
Displaying items 1-50 of 113 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.