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RBG_16_Archaea_41_19_RBG_16_scaffold_1005

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(488..655)
DNA (168bp) protein (56aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(824..1384)
DNA (561bp) protein (187aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1551..1955)
DNA (405bp) protein (135aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1956..3572)
DNA (1617bp) protein (539aa)
Terminase large subunit n=1 Tax=Halovirus HHTV-1 RepID=R4T8P0_9VIRU
Terminase large subunit Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3547..4602)
DNA (1056bp) protein (352aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4758..6857)
DNA (2100bp) protein (700aa)
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=RBG_16_Euryarchaeota_41_19_curated
Replicative DNA helicase Mcm n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5T2_METTP
MCM family protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6841..7572)
DNA (732bp) protein (244aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(7586..7795)
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7915..8148
DNA (234bp) protein (78aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

8391..8576
DNA (186bp) protein (62aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

8657..8806
DNA (150bp) protein (50aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9024..10223)
DNA (1200bp) protein (400aa)
Integrase family protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKK5_METZD
integrase family protein Tax=RBG_16_Euryarchaeota_41_19_curated
integrase family protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_trna_2
unknown

Not on your lists

comp(10274..10346)
DNA (73bp)
transferRNA
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(10413..11444)
DNA (1032bp) protein (344aa)
Acetoin utilization protein n=1 Tax=uncultured archaeon GZfos26D8 RepID=Q5XQ67_9ARCH
histone deacetylase superfamily protein Tax=RBG_16_Euryarchaeota_41_19_curated
histone deacetylase superfamily protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11477..11875)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B805_METTP
pyridoxamine 5'-phosphate oxidase-related, FMN-binding; K07006 Tax=RBG_16_Euryarchaeota_41_19_curated
pyridoxamine 5'-phosphate oxidase-related, FMN-binding
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_trna_1
unknown

Not on your lists

12023..12096
DNA (74bp)
transferRNA
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12410..12736
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5P6_NITMS
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RBG_16_Euryarchaeota_41_19_curated
ArsR family transcriptional regulator
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12726..13142
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLV6_METAC
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13227..13403
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLV6_METAC
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13606..15444)
DNA (1839bp) protein (613aa)
PilT protein domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5W1_METEZ
PilT protein domain-containing protein; K06865 ATPase Tax=RBG_16_Euryarchaeota_41_19_curated
PilT protein domain-containing protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15532..16800
DNA (1269bp) protein (423aa)
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEK4_9EURY
3-isopropylmalate dehydratase, large subunit Tax=RBG_16_Euryarchaeota_41_19_curated
3-isopropylmalate dehydratase, large subunit
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16960..17892
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VJ3_METBU
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18010..18138
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7H0_METEZ
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18239..19036
DNA (798bp) protein (266aa)
putative phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Euryarchaeota_41_19_curated
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB14_METEZ
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19033..20166
DNA (1134bp) protein (378aa)
3-dehydroquinate synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDZ5_9EURY
3-dehydroquinate synthase Tax=RBG_16_Euryarchaeota_41_19_curated
3-dehydroquinate synthase
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20209..20319
DNA (111bp) protein (37aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20349..21620
DNA (1272bp) protein (424aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PYM5_METMA
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21825..22262
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2V8_UNCMA
endonuclease III Tax=RBG_16_Euryarchaeota_41_19_curated
endonuclease III
RBG_16_Archaea_41_19_RBG_16_scaffold_1005_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22270..23280
DNA (1011bp) protein (337aa)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXL5_METHD
N-acetyl-gamma-glutamyl-phosphate reductase, common form Tax=RBG_16_Euryarchaeota_41_19_curated
N-acetyl-gamma-glutamyl-phosphate reductase, common form
Displaying items 1-30 of 51 in total

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