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RBG_16_Archaea_41_19_RBG_16_scaffold_377

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Archaea_41_19_RBG_16_scaffold_377_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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55..186
DNA (132bp) protein (44aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_377_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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238..873
DNA (636bp) protein (212aa)
thymidylate kinase, putative (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RBG_16_Euryarchaeota_41_19_curated
dTMP kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=uncultured archaeon RepID=D1JEM6_9ARCH
RBG_16_Archaea_41_19_RBG_16_scaffold_377_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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878..1276
DNA (399bp) protein (133aa)
UPI0003D1B371 related cluster n=1 Tax=unknown RepID=UPI0003D1B371
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1273..2469)
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDQ5_9EURY
S-adenosylmethionine synthetase Tax=RBG_16_Euryarchaeota_41_19_curated
S-adenosylmethionine synthetase
RBG_16_Archaea_41_19_RBG_16_scaffold_377_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2558..3511
DNA (954bp) protein (318aa)
Wyosine base formation domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMG2_METZD
Wyosine base formation domain-containing protein Tax=RBG_16_Euryarchaeota_41_19_curated
Wyosine base formation domain-containing protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3553..4239
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTD0_METHD
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

4236..5327
DNA (1092bp) protein (364aa)
UPI0003D1C4C2 related cluster n=1 Tax=unknown RepID=UPI0003D1C4C2
condensin subunit ScpB; K06024 segregation and condensation protein B Tax=RBG_16_Euryarchaeota_41_19_curated
condensin subunit ScpB
RBG_16_Archaea_41_19_RBG_16_scaffold_377_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(5454..6746)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M8Q3_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6810..7511
DNA (702bp) protein (234aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RBG_16_Euryarchaeota_41_19_curated
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMW6_METZD
uroporphyrinogen III synthase HEM4
RBG_16_Archaea_41_19_RBG_16_scaffold_377_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7487..8818
DNA (1332bp) protein (444aa)
cbiA1; cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RBG_16_Euryarchaeota_41_19_curated
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUG1_METAC
cbiA1; cobyrinic acid a,c-diamide synthase
RBG_16_Archaea_41_19_RBG_16_scaffold_377_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8920..9147
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000378BBA6
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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9134..9478
DNA (345bp) protein (115aa)
mRNA interferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LCB3_THEPS
PemK-like protein Tax=RBG_16_Euryarchaeota_41_19_curated
PemK-like protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(9482..10246)
DNA (765bp) protein (255aa)
Ubiquinone biosynthesis protein UbiE n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZJV4_THELI
ubiquinone biosynthesis protein UbiE Tax=RBG_16_Euryarchaeota_41_19_curated
ubiquinone biosynthesis protein UbiE
RBG_16_Archaea_41_19_RBG_16_scaffold_377_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10469..11779
DNA (1311bp) protein (437aa)
thrC; threonine synthase; K15527 cysteate synthase [EC:2.5.1.76] Tax=RBG_16_Euryarchaeota_41_19_curated
Cysteate synthase n=2 Tax=Methanosarcina acetivorans RepID=CYAS_METAC
thrC; threonine synthase
RBG_16_Archaea_41_19_RBG_16_scaffold_377_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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11790..12923
DNA (1134bp) protein (378aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K13039 sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] Tax=RBG_16_Euryarchaeota_41_19_curated
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8W0_METEZ
thiamine pyrophosphate domain-containing TPP-binding protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(12938..13648)
DNA (711bp) protein (237aa)
UPF0264 protein MA_4436 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Y4436_METAC
hypothetical protein; K09733 hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13677..14366
DNA (690bp) protein (230aa)
histidine biosynthesis protein; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RBG_16_Euryarchaeota_41_19_curated
Histidine biosynthesis protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7G7_METEZ
histidine biosynthesis protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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14385..15014
DNA (630bp) protein (210aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_377_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15150..15812)
DNA (663bp) protein (221aa)
hydrolase, alpha/beta fold family Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein FbacHQ_08004 id=3544689 bin=GWC1_OD1_38_17 species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16016..17671
DNA (1656bp) protein (552aa)
Thermosome, chaperonin Cpn60/TCP-1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRK6_9EURY
thermosome, chaperonin Cpn60/TCP-1 Tax=RBG_16_Euryarchaeota_41_19_curated
thermosome, chaperonin Cpn60/TCP-1
RBG_16_Archaea_41_19_RBG_16_scaffold_377_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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17709..18851
DNA (1143bp) protein (381aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_377_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(18861..19931)
DNA (1071bp) protein (357aa)
Peptidase M50 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP82_METZD
peptidase M50 Tax=RBG_16_Euryarchaeota_41_19_curated
peptidase M50
RBG_16_Archaea_41_19_RBG_16_scaffold_377_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(19997..20398)
DNA (402bp) protein (134aa)
UPI0003D1B9C8 related cluster n=1 Tax=unknown RepID=UPI0003D1B9C8
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_16_Euryarchaeota_41_19_curated
conserved protein associated with acetyl-CoA C-acyltransferase
RBG_16_Archaea_41_19_RBG_16_scaffold_377_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(20401..21570)
DNA (1170bp) protein (390aa)
Beta-ketoacyl synthase/thiolase n=2 Tax=Methanosarcina mazei RepID=M1Q7Z2_METMZ
Beta-ketoacyl synthase/thiolase Tax=RBG_16_Euryarchaeota_41_19_curated
Beta-ketoacyl synthase/thiolase
RBG_16_Archaea_41_19_RBG_16_scaffold_377_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(21580..22620)
DNA (1041bp) protein (347aa)
UPF0219 protein Mpsy_1638 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD03_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(22658..23509)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q207_METMZ
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
transcriptional regulator
RBG_16_Archaea_41_19_RBG_16_scaffold_377_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(23534..24778)
DNA (1245bp) protein (415aa)
leuC; 3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Euryarchaeota_41_19_curated
Probable methanogen homoaconitase large subunit n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=HACA_METAC
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (large subunit)
RBG_16_Archaea_41_19_RBG_16_scaffold_377_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(24811..25005)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEV3_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(25063..25302)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM4_METMS
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_377_30
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(25341..25832)
DNA (492bp) protein (164aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2); K00610 aspartate carbamoyltransferase regulatory subunit Tax=RBG_16_Euryarchaeota_41_19_curated
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=PYRI_METTP
Displaying items 1-30 of 39 in total

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