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RBG_16_Archaea_41_19_RBG_16_scaffold_344

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Archaea_41_19_RBG_16_scaffold_344_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(272..961)
DNA (690bp) protein (230aa)
fibronectin type III, partial n=1 Tax=Gillisia marina RepID=UPI00029B187A
fibronectin type III Tax=RBG_16_Euryarchaeota_41_19_curated
fibronectin type III
RBG_16_Archaea_41_19_RBG_16_scaffold_344_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(958..3168)
DNA (2211bp) protein (737aa)
pectate lyase/Amb allergen Tax=RBG_16_Euryarchaeota_41_19_curated
N-acetylmuramoyl-L-alanine amidase family 2 id=4560215 bin=GWC2_Ignavibacteria_38_9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
pectate lyase/Amb allergen
RBG_16_Archaea_41_19_RBG_16_scaffold_344_trna_1
unknown

Not on your lists

comp(3296..3380)
DNA (85bp)
transferRNA
RBG_16_Archaea_41_19_RBG_16_scaffold_344_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3391..4299)
DNA (909bp) protein (303aa)
UPI0003D1C148 related cluster n=1 Tax=unknown RepID=UPI0003D1C148
ornithine carbamoyltransferase Tax=RBG_16_Euryarchaeota_41_19_curated
ornithine carbamoyltransferase
RBG_16_Archaea_41_19_RBG_16_scaffold_344_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4364..5692)
DNA (1329bp) protein (443aa)
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_Euryarchaeota_41_19_curated
Thioredoxin reductase id=2480748 bin=GWC2_Proteo_65_14_Ab886 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
FeS cluster assembly scaffold protein NifU
RBG_16_Archaea_41_19_RBG_16_scaffold_344_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5694..6857)
DNA (1164bp) protein (388aa)
nifS-1; class-V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RBG_16_Euryarchaeota_41_19_curated
Probable cysteine desulfurase 1 n=2 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=ISCS1_ARCFU
nifS-1; class-V aminotransferase
RBG_16_Archaea_41_19_RBG_16_scaffold_344_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6885..7046)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8I7_METFA
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(7056..7415)
DNA (360bp) protein (120aa)
hypothetical protein; K07092 Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein; K07092 id=1242370 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative peroxiredoxin
RBG_16_Archaea_41_19_RBG_16_scaffold_344_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7736..9142
DNA (1407bp) protein (469aa)
Prokaryotic ATPase, AAA superfamily n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5X0_THEGJ
ATPase; K06921 Tax=RBG_16_Euryarchaeota_41_19_curated
ATPase
RBG_16_Archaea_41_19_RBG_16_scaffold_344_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9143..9460
DNA (318bp) protein (106aa)
hsdR-2; type I restriction enzyme subunit R Tax=RBG_16_Euryarchaeota_41_19_curated
HsdR family type I site-specific deoxyribonuclease id=4419569 bin=GWF2_Ignavibacteria_35_20 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hsdR-2; type I restriction enzyme subunit R
RBG_16_Archaea_41_19_RBG_16_scaffold_344_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9660..10199
DNA (540bp) protein (180aa)
HsdR protein (EC:3.1.21.-); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RBG_16_Euryarchaeota_41_19_curated
HsdR protein (EC:3.1.21.-)
Type I site-specific deoxyribonuclease, HsdR family id=4383982 bin=GWF2_Ignavibacteria_35_20 species=Methylotenera mobilis genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
RBG_16_Archaea_41_19_RBG_16_scaffold_344_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(10262..11512)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PU45_METMZ
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11509..12816)
DNA (1308bp) protein (436aa)
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Euryarchaeota_41_19_curated
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNF8_METZD
RBG_16_Archaea_41_19_RBG_16_scaffold_344_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12913..13134)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E92_METBF
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13136..14116)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUU8_METHD
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14227..14403)
DNA (177bp) protein (59aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_344_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14538..15044)
DNA (507bp) protein (169aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_344_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15192..15326
DNA (135bp) protein (45aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_344_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15943..16041
DNA (99bp) protein (33aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_344_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16219..17034
DNA (816bp) protein (272aa)
Transcriptional regulator n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RWG5_CENSY
transcriptional regulator Tax=RBG_16_Euryarchaeota_41_19_curated
Transcriptional regulator
RBG_16_Archaea_41_19_RBG_16_scaffold_344_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

17037..17141
DNA (105bp) protein (35aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_344_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

17247..17828
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8J6_NITGG
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18567..19367
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375E53E
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19360..19926
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D91C7
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(19917..20687)
DNA (771bp) protein (257aa)
Glycosyl transferase, family 39 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TZ0_SOLUE
glycosyl transferase family protein Tax=RBG_16_Euryarchaeota_41_19_curated
glycosyl transferase family protein
RBG_16_Archaea_41_19_RBG_16_scaffold_344_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21034..21258
DNA (225bp) protein (75aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_344_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(21225..21938)
DNA (714bp) protein (238aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E735_METEZ
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Euryarchaeota_41_19_curated
short-chain dehydrogenase/reductase SDR
RBG_16_Archaea_41_19_RBG_16_scaffold_344_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22175..23149
DNA (975bp) protein (325aa)
bioB; biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] Tax=RBG_16_Euryarchaeota_41_19_curated
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=BIOB_CARHZ
RBG_16_Archaea_41_19_RBG_16_scaffold_344_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

23142..23909
DNA (768bp) protein (256aa)
6-carboxyhexanoate/CoA ligase (EC:6.2.1.14) Tax=RBG_16_Euryarchaeota_41_19_curated
bioW; 6-carboxyhexanoate--CoA ligase BioW (EC:6.2.1.14)
6-carboxyhexanoate--CoA ligase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMT0_DESK7
RBG_16_Archaea_41_19_RBG_16_scaffold_344_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

23938..24942
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KH83_CYAP7
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
Displaying items 1-30 of 43 in total

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