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rifcsphigho2_01_scaffold_2479

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_2479_1
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

1..171
-----------------
DNA (171bp)
protein (57aa)
hypothetical protein Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_2479_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(581..2026)
-----------------
DNA (1446bp)
protein (482aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Tax=RBG_13_Pacearchaeota_36_9_curated
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_01_scaffold_2479_3
unknown

Not on your lists

2199..2351
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2320..4650
-----------------
DNA (2331bp)
protein (777aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=CG_Pacearch_05
DNA gyrase subunit B (EC:5.99.1.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036286E1
rifcsphigho2_01_scaffold_2479_5
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4660..5154
-----------------
DNA (495bp)
protein (165aa)
TIGR00725 family protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TLR7_9CYAN
hypothetical protein
TIGR00725 family protein {ECO:0000313|EMBL:AFY83358.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
rifcsphigho2_01_scaffold_2479_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


5151..8921
-----------------
DNA (3771bp)
protein (1257aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DNA gyrase subunit A n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LE70_9BACT
gyrA; DNA gyrase subunit A
rifcsphigho2_01_scaffold_2479_7
unknown

Not on your lists

comp(8938..9054)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(9193..10473)
-----------------
DNA (1281bp)
protein (427aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Pacearch_05
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036938B4
Serine-tRNA ligase
rifcsphigho2_01_scaffold_2479_9
unknown

Not on your lists

10534..11397
-----------------
DNA (864bp)
protein (288aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_10
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

11430..11804
-----------------
DNA (375bp)
protein (125aa)
Acetobutylicum phosphotransbutyrylase n=2 Tax=Clostridium botulinum RepID=F4AAK2_CLOBO
acetobutylicum phosphotransbutyrylase
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_2479_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


11988..12296
-----------------
DNA (309bp)
protein (103aa)
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=CG_Pacearch_05
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 id=5043693 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps10p; 30S ribosomal protein S10P
rifcsphigho2_01_scaffold_2479_12
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

12356..13033
-----------------
DNA (678bp)
protein (226aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1263032 species="Bacteria; Firmicutes; environ
Thymidylate kinase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JA38_9FIRM
putative thymidylate kinase
rifcsphigho2_01_scaffold_2479_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(13034..13195)
-----------------
DNA (162bp)
protein (54aa)
Tax=CG_Pacearch_04
rifcsphigho2_01_scaffold_2479_14
unknown

Not on your lists

comp(13290..13547)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_15
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13625..14254)
-----------------
DNA (630bp)
protein (210aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YLF2_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR02604.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
putative ABC transporter ATP-binding protein
rifcsphigho2_01_scaffold_2479_16
unknown

Not on your lists

comp(14311..15090)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_17
unknown

Not on your lists

comp(15173..15385)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_18
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

15491..16345
-----------------
DNA (855bp)
protein (285aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_2479_19
unknown

Not on your lists

comp(16342..16692)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_20
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(16694..16969)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein Tax=CG_Pacearch_05
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_2479_21
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(16966..17622)
-----------------
DNA (657bp)
protein (219aa)
id=5045884 Tax=CG_Pacearch_05
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_2479_22
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(17959..18684)
-----------------
DNA (726bp)
protein (242aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
hypothetical protein Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_2479_23
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(18715..18855)
-----------------
DNA (141bp)
protein (47aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_2479_24
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(18889..21477)
-----------------
DNA (2589bp)
protein (863aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Pacearch_05
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
rifcsphigho2_01_scaffold_2479_25
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(21562..21930)
-----------------
DNA (369bp)
protein (123aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_2479_26
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(21972..22286)
-----------------
DNA (315bp)
protein (105aa)
Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_2479_27
unknown

Not on your lists

22389..22937
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_28
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

22991..24715
-----------------
DNA (1725bp)
protein (575aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Pacearch_05
translation initiation factor eaif-5b
rifcsphigho2_01_scaffold_2479_29
unknown

Not on your lists

24776..25597
-----------------
DNA (822bp)
protein (274aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2479_30
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(25594..26217)
-----------------
DNA (624bp)
protein (208aa)
peptidase S54, rhomboid family protein; K07059 Tax=RBG_13_Pacearchaeota_36_9_curated
Peptidase S54, rhomboid family protein id=4688817 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peptidase S54, rhomboid family protein
Displaying items 1-30 of 42 in total

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