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SCNPILOT_CONT_300_BF_Rhizobiales_61_16

SCNPILOT_EXPT_1000_BF_Rhizobiales_61_5
In projects: SCNPILOT_EXPT_1000_BF

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 913 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_1000_bf_scaffold_9505 7 5704 bp 58.73 4.82 81.89
SCNpilot_expt_1000_bf_scaffold_4423
Order: Rhizobiales (71.43%)
7 7197 bp 62.00 4.72 91.58
SCNpilot_expt_1000_bf_scaffold_6472
Order: Rhizobiales (100%)
7 5800 bp 63.95 5.47 93.10
SCNpilot_expt_1000_bf_scaffold_15145
Phylum: Proteobacteria (85.71%)
7 4225 bp 62.84 4.32 87.76
SCNpilot_expt_1000_bf_scaffold_4436
Class: Alphaproteobacteria (57.14%)
7 8980 bp 62.54 5.48 88.73
SCNpilot_expt_1000_bf_scaffold_12558 7 5767 bp 61.56 4.29 72.31
SCNpilot_expt_1000_bf_scaffold_6487
Phylum: Proteobacteria (57.14%)
7 8198 bp 61.99 4.36 91.85
SCNpilot_expt_1000_bf_scaffold_6500
Order: Rhizobiales (71.43%)
7 6266 bp 59.29 4.31 84.26
SCNpilot_expt_1000_bf_scaffold_5053
Phylum: Proteobacteria (57.14%)
7 6115 bp 59.93 5.15 84.48
SCNpilot_expt_1000_bf_scaffold_4716
Class: Betaproteobacteria (57.14%)
7 6412 bp 57.08 4.72 91.14
SCNpilot_expt_1000_bf_scaffold_7487
Order: Rhizobiales (57.14%)
7 5008 bp 59.62 4.54 92.43
SCNpilot_expt_1000_bf_scaffold_14887
Order: Rhizobiales (85.71%)
7 5241 bp 61.55 4.87 84.43
SCNpilot_expt_1000_bf_scaffold_4471
Domain: Bacteria (71.43%)
7 6671 bp 60.53 3.79 91.74
SCNpilot_expt_1000_bf_scaffold_14126
Order: Rhizobiales (85.71%)
7 4816 bp 61.23 3.79 67.59
SCNpilot_expt_1000_bf_scaffold_24426
Order: Rhizobiales (100%)
7 6129 bp 60.81 4.89 80.27
SCNpilot_expt_1000_bf_scaffold_13691
Order: Rhizobiales (85.71%)
7 5471 bp 62.20 5.39 96.40
SCNpilot_expt_1000_bf_scaffold_14403
Order: Rhizobiales (83.33%)
6 7252 bp 61.97 4.65 89.35
SCNpilot_expt_1000_bf_scaffold_7779
Order: Rhizobiales (50%)
6 4474 bp 57.78 3.63 88.04
SCNpilot_expt_1000_bf_scaffold_4763
Order: Rhizobiales (83.33%)
6 7671 bp 61.71 5.93 94.37
SCNpilot_expt_1000_bf_scaffold_5111
Order: Rhizobiales (83.33%)
6 6429 bp 62.86 4.63 88.47
SCNpilot_expt_1000_bf_scaffold_6314
Class: Alphaproteobacteria (66.67%)
6 5205 bp 60.92 5.14 91.93
SCNpilot_expt_1000_bf_scaffold_11311
Order: Rhizobiales (83.33%)
6 3346 bp 65.15 6.43 93.07
SCNpilot_expt_1000_bf_scaffold_15764
Order: Rhizobiales (50%)
6 5325 bp 60.41 4.37 85.75
SCNpilot_expt_1000_bf_scaffold_8246
Domain: Bacteria (66.67%)
6 4261 bp 58.60 4.81 96.46
SCNpilot_expt_1000_bf_scaffold_17685
Order: Rhizobiales (83.33%)
6 4934 bp 59.22 3.85 85.73
SCNpilot_expt_1000_bf_scaffold_7314
Order: Rhizobiales (83.33%)
6 4672 bp 61.79 5.24 88.36
SCNpilot_expt_1000_bf_scaffold_19922
Phylum: Proteobacteria (50%)
6 3605 bp 52.21 3.88 75.81
SCNpilot_expt_1000_bf_scaffold_9651
Phylum: Proteobacteria (66.67%)
6 3788 bp 58.05 4.29 92.98
SCNpilot_expt_1000_bf_scaffold_6869
Phylum: Proteobacteria (50%)
6 8118 bp 59.76 4.65 66.37
SCNpilot_expt_1000_bf_scaffold_8791
Order: Rhizobiales (66.67%)
6 5428 bp 60.98 4.61 86.88
SCNpilot_expt_1000_bf_scaffold_18707
Order: Rhizobiales (83.33%)
6 6825 bp 58.97 4.25 80.53
SCNpilot_expt_1000_bf_scaffold_6881
Order: Rhizobiales (66.67%)
6 8397 bp 56.68 5.06 73.35
SCNpilot_expt_1000_bf_scaffold_18460
Phylum: Proteobacteria (83.33%)
6 4159 bp 61.84 4.09 95.72
SCNpilot_expt_1000_bf_scaffold_21165 6 2539 bp 56.87 3.74 77.75
SCNpilot_expt_1000_bf_scaffold_10086
Order: Rhizobiales (66.67%)
6 4768 bp 61.01 4.82 82.49
SCNpilot_expt_1000_bf_scaffold_4583
Genus: Bradyrhizobium (50%)
6 6547 bp 62.00 4.66 93.20
SCNpilot_expt_1000_bf_scaffold_23496
Phylum: Proteobacteria (83.33%)
6 3501 bp 62.64 4.43 85.00
SCNpilot_expt_1000_bf_scaffold_18982
Order: Rhizobiales (50%)
6 4610 bp 62.04 4.93 76.33
SCNpilot_expt_1000_bf_scaffold_6382
Species: Ralstonia sp. GA3-3 (66.67%)
6 5675 bp 58.85 4.67 87.86
SCNpilot_expt_1000_bf_scaffold_19193
Order: Rhizobiales (50%)
6 3994 bp 60.34 5.51 76.39
SCNpilot_expt_1000_bf_scaffold_6132
Order: Rhizobiales (83.33%)
6 7519 bp 63.03 5.59 93.68
SCNpilot_expt_1000_bf_scaffold_23253 6 4060 bp 61.08 3.63 77.00
SCNpilot_expt_1000_bf_scaffold_8569
Order: Burkholderiales (66.67%)
6 4685 bp 58.48 4.22 89.39
SCNpilot_expt_1000_bf_scaffold_16404
Phylum: Proteobacteria (50%)
6 6009 bp 59.31 4.78 74.69
SCNpilot_expt_1000_bf_scaffold_3414
Species: Azospirillum brasilense (50%)
6 8034 bp 61.00 5.41 89.32
SCNpilot_expt_1000_bf_scaffold_7632
Class: Betaproteobacteria (66.67%)
6 5113 bp 60.53 5.04 90.48
SCNpilot_expt_1000_bf_scaffold_6405
Order: Rhizobiales (50%)
6 5640 bp 61.54 4.12 85.85
SCNpilot_expt_1000_bf_scaffold_7126
Genus: Rhizobium (50%)
6 6037 bp 58.90 4.56 80.40
SCNpilot_expt_1000_bf_scaffold_11918
Class: Alphaproteobacteria (66.67%)
6 3784 bp 58.46 4.29 72.86
SCNpilot_expt_1000_bf_scaffold_34960
Order: Rhizobiales (66.67%)
6 5517 bp 58.64 3.85 54.32
Displaying items 301-350 of 913 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.