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SCNpilot_expt_500_p_scaffold_6815

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_6815_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..186
DNA (186bp) protein (62aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Adenylosuccinate synthetase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=PURA_RHOPS
SCNpilot_expt_500_p_scaffold_6815_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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293..1879
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLS7_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29399.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_expt_500_p_scaffold_6815_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1867..2493
DNA (627bp) protein (209aa)
formyl transferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] rbh
Formyl transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P6_9BRAD rbh
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:CEG09252.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_500_p_scaffold_6815_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2709..2927)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFZ5_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG09251.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_500_p_scaffold_6815_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3333..4223)
DNA (891bp) protein (297aa)
RNA polymerase sigma factor RpoH n=2 Tax=Oligotropha carboxidovorans RepID=B6JIL5_OLICO rbh
rpoH; RNA polymerase sigma-32 factor RpoH; K03089 RNA polymerase sigma-32 factor rbh
RNA polymerase sigma-32 factor RpoH {ECO:0000313|EMBL:AEI05678.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_p_scaffold_6815_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4443..5375)
DNA (933bp) protein (311aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7S8_9BRAD rbh
SCNpilot_expt_500_p_scaffold_6815_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5497..5829
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P8T4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36050.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
Displaying 7 items

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