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scnpilot_solids2_trim150_scaffold_96

Search features with annotation key words

Displaying items 31-60 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_96_31
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27348..28667
DNA (1320bp) protein (440aa)
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E7_9GAMM
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EIL95038.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
folylpolyglutamate synthase/dihydrofolate synthase
scnpilot_solids2_trim150_scaffold_96_32
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28708..29727
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRK1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02093.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_33
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29771..30409
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95040.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative membrane protein, required for colicin V production
scnpilot_solids2_trim150_scaffold_96_34
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30464..31939
DNA (1476bp) protein (492aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F0_9GAMM
scnpilot_solids2_trim150_scaffold_96_35
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31976..32785
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKJ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99984.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_36
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32892..33311
DNA (420bp) protein (140aa)
DNA damage-inducible protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B70D62
helicase domain-containing protein
Helicase domain protein {ECO:0000313|EMBL:AEG70102.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
scnpilot_solids2_trim150_scaffold_96_37
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33415..33624
DNA (210bp) protein (70aa)
antitoxin n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B58CA9
Antitoxin {ECO:0000313|EMBL:KIE17441.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_38
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33621..34043
DNA (423bp) protein (141aa)
PilT domain-containing protein id=12554441 bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PilT domain-containing protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
scnpilot_solids2_trim150_scaffold_96_trna_7
unknown

Not on your lists

comp(34169..34242)
DNA (74bp)
transferRNA Pro
scnpilot_solids2_trim150_scaffold_96_39
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


34406..35779
DNA (1374bp) protein (458aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Histidine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLN5_9GAMM
scnpilot_solids2_trim150_scaffold_96_40
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35803..36201
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034AC5F3
Uncharacterized protein {ECO:0000313|EMBL:AHX12745.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_41
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36205..37236)
DNA (1032bp) protein (344aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NF16_9GAMM
ADP-heptose:LPS heptosyltransferase
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:AGG88577.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_42
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37255..38025
DNA (771bp) protein (257aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNZ4_9GAMM
Mn2+-dependent serine/threonine protein kinase
scnpilot_solids2_trim150_scaffold_96_43
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38022..38783
DNA (762bp) protein (254aa)
Beta-lactamase superfamily metal-dependent hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKI7_9GAMM
Beta-lactamase superfamily metal-dependent hydrolase {ECO:0000313|EMBL:EIL99978.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
metal-dependent hydrolase, beta-lactamase superfamily III
scnpilot_solids2_trim150_scaffold_96_trna_1
unknown

Not on your lists

38929..39018
DNA (90bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_96_44
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39082..39861)
DNA (780bp) protein (260aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W443_9GAMM
scnpilot_solids2_trim150_scaffold_96_45
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39873..40604)
DNA (732bp) protein (244aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB2_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AGG89696.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_46
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40696..42249)
DNA (1554bp) protein (518aa)
Exopolyphosphatase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKD3_9GAMM
Exopolyphosphatase {ECO:0000313|EMBL:EIL87674.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
exopolyphosphatase
scnpilot_solids2_trim150_scaffold_96_47
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42320..44419)
DNA (2100bp) protein (700aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Polyphosphate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB4_9GAMM
polyphosphate kinase 1
scnpilot_solids2_trim150_scaffold_96_48
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44537..45199)
DNA (663bp) protein (221aa)
Elongation factor P n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL3_9GAMM
Elongation factor P {ECO:0000313|EMBL:EIL88104.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
translation elongation factor P/translation initiation factor 5A
scnpilot_solids2_trim150_scaffold_96_49
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45221..45988)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WML0_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIM00702.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_96_50
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46228..47283
DNA (1056bp) protein (352aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035CCC64
Transcriptional regulator {ECO:0000313|EMBL:KGI78134.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_96_51
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47591..50128
DNA (2538bp) protein (846aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JXA9_STEMA
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:AEM51068.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids2_trim150_scaffold_96_52
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50144..52144
DNA (2001bp) protein (667aa)
hypothetical protein; K00316 spermidine dehydrogenase [EC:1.5.99.6]
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z619_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD59801.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
scnpilot_solids2_trim150_scaffold_96_53
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52191..53474
DNA (1284bp) protein (428aa)
fucose permease n=2 Tax=Xanthomonas axonopodis RepID=UPI000319C77C rbh
Fucose permease {ECO:0000313|EMBL:KHD62159.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
fucP; L-fucose:H+ symporter; K02429 MFS transporter, FHS family, L-fucose permease
scnpilot_solids2_trim150_scaffold_96_54
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53540..54376
DNA (837bp) protein (279aa)
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L341_FRAAD rbh
aldo/keto reductase, diketogulonate reductase rbh
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:AFC84839.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids2_trim150_scaffold_96_55
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54385..55395
DNA (1011bp) protein (337aa)
fructokinase; K00847 fructokinase [EC:2.7.1.4]
fructokinase n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039DFB93
Fructokinase {ECO:0000313|EMBL:AAF84419.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids2_trim150_scaffold_96_56
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55417..55719
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037B5B28
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EYT60287.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
Antibiotic biosynthesis monooxygenase
scnpilot_solids2_trim150_scaffold_96_57
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55697..56071)
DNA (375bp) protein (125aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLL2_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL88103.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_96_58
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56280..56708
DNA (429bp) protein (143aa)
Putative integral membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP7_9GAMM
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AGG88376.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 31-60 of 244 in total

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