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scnpilot_solids2_trim150_scaffold_96

Search features with annotation key words

Displaying items 61-90 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_96_59
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56759..57247)
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTQ0_9GAMM
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AGG88379.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_60
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57290..58195)
DNA (906bp) protein (302aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA74_9GAMM
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIL96365.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
isopropylmalate/homocitrate/citramalate synthase
scnpilot_solids2_trim150_scaffold_96_61
unknown

Not on your lists

comp(58231..58419)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_96_62
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58490..60478)
DNA (1989bp) protein (663aa)
acetyl/propionyl-CoA carboxylase, alpha subunit (EC:6.3.4.14 6.4.1.4)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X3_9GAMM
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:EIL94864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_96_63
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60565..61359)
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X4_9GAMM
Enoyl-CoA hydratase {ECO:0000313|EMBL:EIL94865.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
enoyl-CoA hydratase/carnithine racemase
scnpilot_solids2_trim150_scaffold_96_64
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(61515..61778)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Rhodanobacter fulvus Jip2 PF3_9GAMM">RepID=I4VPF3_9GAMM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SSU ribosomal protein S20P
scnpilot_solids2_trim150_scaffold_96_65
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61867..63603
DNA (1737bp) protein (579aa)
Integral membrane protein MviN n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM56_9GAMM
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
integral membrane protein MviN
scnpilot_solids2_trim150_scaffold_96_66
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63634..64587
DNA (954bp) protein (318aa)
FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Riboflavin kinase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKV0_9GAMM
scnpilot_solids2_trim150_scaffold_96_67
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64676..67567
DNA (2892bp) protein (964aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 PF6_9GAMM">RepID=I4VPF6_9GAMM
scnpilot_solids2_trim150_scaffold_96_68
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67599..68099
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNY9_9GAMM
scnpilot_solids2_trim150_scaffold_96_69
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68219..69118
DNA (900bp) protein (300aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W819_9GAMM
scnpilot_solids2_trim150_scaffold_96_trna_2
unknown

Not on your lists

69220..69292
DNA (73bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_96_70
unknown

Not on your lists

comp(69386..69610)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_96_trna_6
unknown

Not on your lists

comp(69788..69859)
DNA (72bp)
transferRNA Val
scnpilot_solids2_trim150_scaffold_96_71
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70034..70375
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W087_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92878.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_72
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70463..71881
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD81_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97422.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane-bound serine protease (ClpP class) rbh
scnpilot_solids2_trim150_scaffold_96_73
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71894..72700
DNA (807bp) protein (269aa)
Membrane protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD80_9GAMM
Membrane protease {ECO:0000313|EMBL:EIL97421.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protease subunit, stomatin/prohibitin
scnpilot_solids2_trim150_scaffold_96_74
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72818..75607)
DNA (2790bp) protein (930aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD71_9GAMM
Zinc carboxypeptidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_96_75
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75822..78719)
DNA (2898bp) protein (966aa)
TonB-dependent receptor domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3L4_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:GAN45521.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative TonB dependent receptor protein; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_96_76
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79285..80802)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97409.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_77
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80972..81757
DNA (786bp) protein (262aa)
Putative methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD67_9GAMM
Putative methyltransferase {ECO:0000313|EMBL:EIL97408.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_96_78
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81945..82106
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W487_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_96_79
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82302..83462
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM78_9GAMM
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIM00570.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_96_80
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83695..86868)
DNA (3174bp) protein (1058aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W601_9GAMM
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL94892.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_solids2_trim150_scaffold_96_81
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86880..88067)
DNA (1188bp) protein (396aa)
Putative RND family acriflavine resistance protein A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W093_9GAMM
Putative RND family acriflavine resistance protein A {ECO:0000313|EMBL:EIL92884.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_96_82
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88607..90331
DNA (1725bp) protein (575aa)
Carboxylic ester hydrolase {ECO:0000256|RuleBase:RU361235}; EC=3.1.1.- {ECO:0000256|RuleBase:RU361235};; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein; K03929 para-nitrobenzyl esterase [EC:3.1.1.-] rbh
Carboxylesterase type B n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZA4_9BRAD rbh
scnpilot_solids2_trim150_scaffold_96_83
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90435..91550
DNA (1116bp) protein (372aa)
dienelactone hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B374FB
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:ABD26025.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids2_trim150_scaffold_96_84
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91643..92779)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G800_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD26023.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids2_trim150_scaffold_96_85
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92836..95757)
DNA (2922bp) protein (974aa)
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B486BB rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABD26029.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids2_trim150_scaffold_96_86
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96136..97251)
DNA (1116bp) protein (372aa)
lipase (EC:3.1.1.3)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003691D2F
Uncharacterized protein {ECO:0000313|EMBL:AJP72803.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying items 61-90 of 244 in total

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