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scnpilot_solids2_trim150_scaffold_96

Search features with annotation key words

Displaying items 181-210 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_96_174
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

213633..214391
DNA (759bp) protein (253aa)
3-oxoacyl-ACP reductase id=4144370 bin=GWF2_Bacteroidetes_35_48 species=Mesoflavibacter zeaxanthinifaciens genus=Mesoflavibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
short-chain dehydrogenase/reductase SDR
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids2_trim150_scaffold_96_175
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214680..215420)
DNA (741bp) protein (247aa)
hypothetical protein; K03424 TatD DNase family protein [EC:3.1.21.-]
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00037F6C05 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL13400.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
scnpilot_solids2_trim150_scaffold_96_176
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215420..216733)
DNA (1314bp) protein (438aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=487899 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. viticola.;"
Uncharacterized protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RMI2_9PSED rbh
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_96_177
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216730..217485)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Acinetobacter baumannii RepID=UPI0002BB9422
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
scnpilot_solids2_trim150_scaffold_96_178
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217486..219264)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002D36C15 rbh
KAP family P-loop domain protein {ECO:0000313|EMBL:CDN20730.1}; TaxID=487899 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. viticola.;"
KAP P-loop domain protein rbh
scnpilot_solids2_trim150_scaffold_96_179
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219784..221070
DNA (1287bp) protein (429aa)
Phage tail sheath protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VU11_9SPHN
Phage tail sheath protein {ECO:0000313|EMBL:EZP73016.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
phage tail sheath family protein; K06907 rbh
scnpilot_solids2_trim150_scaffold_96_180
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221167..222027)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SZV7_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KGI78808.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative trypsin protease
scnpilot_solids2_trim150_scaffold_96_181
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222051..223085)
DNA (1035bp) protein (345aa)
Transcriptional regulator, AraC family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGC1_PHEZH
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACG77245.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_96_182
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223143..224114)
DNA (972bp) protein (324aa)
Transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR65_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL89706.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
AraC family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_96_183
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224187..225149)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003478BFF
Beta-lactamase {ECO:0000313|EMBL:AHX12140.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids2_trim150_scaffold_96_184
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225195..226487)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY38_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92129.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Major Facilitator Superfamily transporter rbh
scnpilot_solids2_trim150_scaffold_96_185
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226648..227253)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92130.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_186
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227454..228806)
DNA (1353bp) protein (451aa)
Fis family sigma-54 specific transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRZ3_9GAMM rbh
Fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:EIL89984.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_solids2_trim150_scaffold_96_187
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229369..230514
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4J5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP42551.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
scnpilot_solids2_trim150_scaffold_96_188
unknown

Not on your lists

230710..230844
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_96_189
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230846..231097
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348AF62
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_96_190
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231094..231789
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003479001
Peptidase protein {ECO:0000313|EMBL:EIL89032.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative bacteriocin processing protein, Peptidase C39 family, exported
scnpilot_solids2_trim150_scaffold_96_191
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231953..232375
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030472E7
Uncharacterized protein {ECO:0000313|EMBL:AIF48656.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative lipoprotein
scnpilot_solids2_trim150_scaffold_96_192
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232454..233845
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E1D17A
Acetate kinase {ECO:0000313|EMBL:AIF48655.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_193
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233842..234783)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CF557 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIF46030.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_96_194
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234927..235472
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000307D413 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX14983.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_195
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

235717..236436
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003697F00
Putative glycerol uptake facilitator {ECO:0000313|EMBL:AHH15612.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
Aquaporin Z
scnpilot_solids2_trim150_scaffold_96_196
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236465..236968)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_197
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236970..237836)
DNA (867bp) protein (289aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ7_9GAMM
beta-propeller domain-containing protein, methanol dehydrogenase
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:AGG88058.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_96_198
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237841..238476)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV34_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91075.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_199
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238662..242408)
DNA (3747bp) protein (1249aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E7D307
Uncharacterized protein {ECO:0000313|EMBL:AHX13904.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_96_200
unknown

Not on your lists

242645..242815
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_96_201
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242816..243394
DNA (579bp) protein (193aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2',5' RNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTW3_9GAMM
2',5' RNA ligase {ECO:0000313|EMBL:EIL90654.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_96_202
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243534..244154)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345ED79
Dihydrofolate reductase {ECO:0000313|EMBL:KGM55781.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
dihydrofolate reductase
scnpilot_solids2_trim150_scaffold_96_203
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244364..244867)
DNA (504bp) protein (168aa)
arsC; Arsenate reductase (EC:1.20.4.-)
ArsC family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1E3V7_PSEAI
Arsenate reductase {ECO:0000313|EMBL:AHB06147.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
Displaying items 181-210 of 244 in total

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