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scnpilot_solids2_trim150_scaffold_105

Search features with annotation key words

Displaying items 31-60 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_105_31
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44210..44923)
-----------------
DNA (714bp)
protein (238aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Lipoprotein releasing system, ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPA6_9GAMM
lipoprotein releasing system, ATP-binding protein
scnpilot_solids2_trim150_scaffold_105_32
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44916..46157)
-----------------
DNA (1242bp)
protein (414aa)
Lipoprotein releasing system transmembrane protein LolC/E family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB1_9GAMM
lipoprotein releasing system, transmembrane protein, LolC/E family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_105_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46403..47581
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXA3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89292.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_105_34
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47578..48324
-----------------
DNA (747bp)
protein (249aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W727_9GAMM
leucyl/phenylalanyl-tRNA--protein transferase
scnpilot_solids2_trim150_scaffold_105_35
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48334..49146)
-----------------
DNA (813bp)
protein (271aa)
Putative domain HDIG-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NER8_9GAMM
putative domain HDIG-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_105_36
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49261..50532)
-----------------
DNA (1272bp)
protein (424aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM5_9GAMM
scnpilot_solids2_trim150_scaffold_105_37
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50814..52277
-----------------
DNA (1464bp)
protein (488aa)
Cbb3-type cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W131_9GAMM
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIL93172.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c oxidase, cbb3-type, subunit I
scnpilot_solids2_trim150_scaffold_105_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52395..53048
-----------------
DNA (654bp)
protein (218aa)
Cbb3-type cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W724_9GAMM
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL95265.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c oxidase, cbb3-type, subunit II
scnpilot_solids2_trim150_scaffold_105_39
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53045..53257
-----------------
DNA (213bp)
protein (71aa)
Cytochrome c oxidase subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W129_9GAMM
Cytochrome c oxidase subunit {ECO:0000313|EMBL:EIL93170.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ccoQ; cytochrome c oxidase subunit; K00407 cytochrome c oxidase cbb3-type subunit IV
scnpilot_solids2_trim150_scaffold_105_40
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53254..54162
-----------------
DNA (909bp)
protein (303aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W128_9GAMM
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c oxidase, cbb3-type, subunit III
scnpilot_solids2_trim150_scaffold_105_41
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54379..56658
-----------------
DNA (2280bp)
protein (760aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W127_9GAMM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIL93168.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
heavy metal translocating P-type ATPase
scnpilot_solids2_trim150_scaffold_105_42
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56655..56861
-----------------
DNA (207bp)
protein (69aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK13_9GAMM
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EIL99804.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome oxidase maturation protein, cbb3-type
scnpilot_solids2_trim150_scaffold_105_43
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57070..58485
-----------------
DNA (1416bp)
protein (472aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W122_9GAMM
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EIL93163.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids2_trim150_scaffold_105_44
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58567..59925
-----------------
DNA (1359bp)
protein (453aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W121_9GAMM
scnpilot_solids2_trim150_scaffold_105_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60036..61466
-----------------
DNA (1431bp)
protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W711_9GAMM
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL95252.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_105_46
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61487..61993)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W117_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93158.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_105_47
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62255..64024
-----------------
DNA (1770bp)
protein (590aa)
ABC transporter ATP-binding protein n=1 Tax=Dyella japonica RepID=UPI0003167AD8
ABC transporter {ECO:0000313|EMBL:AHX13610.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ABC transporter, permease/ATP-binding protein
scnpilot_solids2_trim150_scaffold_105_48
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64101..64838)
-----------------
DNA (738bp)
protein (246aa)
PEP anchor domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZLS2_9RHOO
PEP anchor domain-containing protein {ECO:0000313|EMBL:ENO95492.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
PEP anchor domain-containing protein
scnpilot_solids2_trim150_scaffold_105_49
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65151..65339)
-----------------
DNA (189bp)
protein (63aa)
Type I restriction enzyme subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU53_9GAMM
Type I restriction enzyme subunit {ECO:0000313|EMBL:EIL90744.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_105_50
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65478..65738)
-----------------
DNA (261bp)
protein (87aa)
type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type I restriction enzyme subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU53_9GAMM
Type I restriction enzyme subunit {ECO:0000313|EMBL:EIL90744.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_105_51
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65722..66183)
-----------------
DNA (462bp)
protein (154aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00037D090E
stbB; plasmid stability protein StbB; K07062
scnpilot_solids2_trim150_scaffold_105_52
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66198..66452)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00037E7A49
Prevent-host-death family protein {ECO:0000313|EMBL:KDM65700.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
prevent-host-death family protein
scnpilot_solids2_trim150_scaffold_105_53
unknown

Not on your lists

comp(66647..66739)
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_105_54
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67188..67943
-----------------
DNA (756bp)
protein (252aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035E259D
Uncharacterized protein {ECO:0000313|EMBL:EIL93118.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
PEP-CTERM putative exosortase interaction domain-containing protein
scnpilot_solids2_trim150_scaffold_105_55
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68184..68738
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUT1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90972.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_105_56
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68799..69722)
-----------------
DNA (924bp)
protein (308aa)
Aldo/keto reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM17_9GAMM
Aldo/keto reductase {ECO:0000313|EMBL:EIL88258.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aldo/keto reductase
scnpilot_solids2_trim150_scaffold_105_57
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70232..71731
-----------------
DNA (1500bp)
protein (500aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K03781 catalase [EC:1.11.1.6] rbh
Catalase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z6_9GAMM
scnpilot_solids2_trim150_scaffold_105_58
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71892..72317
-----------------
DNA (426bp)
protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6B8L9_PSEVI
Probable dioxygenase {ECO:0000313|EMBL:CDM25624.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K06991
scnpilot_solids2_trim150_scaffold_105_59
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72335..74305)
-----------------
DNA (1971bp)
protein (657aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ3_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL92600.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
prolyl oligopeptidase family protein
scnpilot_solids2_trim150_scaffold_105_60
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74519..75181
-----------------
DNA (663bp)
protein (221aa)
Thiopurine S-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626}; EC=2.1.1.67 {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626};; Thiopurine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thiopurine S-methyltransferase; K00569 thiopurine S-methyltransferase [EC:2.1.1.67]
Thiopurine S-methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V3_9GAMM
Displaying items 31-60 of 111 in total

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