name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_105_61
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
75280..75966
----------------- DNA (687bp) protein (229aa) |
2-keto-4-pentenoate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT48_9GAMM
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:EIM02640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
|
|
scnpilot_solids2_trim150_scaffold_105_62
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
76058..76468
----------------- DNA (411bp) protein (137aa) |
Large-conductance mechanosensitive channel n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW6_9GAMM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
large conductance mechanosensitive channel protein
|
|
scnpilot_solids2_trim150_scaffold_105_63
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
76588..78168
----------------- DNA (1581bp) protein (527aa) |
Putative ymdC hydrolase, of the phospholipase family n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8W4J5_MARHY
phospholipase D/transphosphatidylase
Putative ymdC hydrolase, of the phospholipase family {ECO:0000313|EMBL:CCG96582.1}; TaxID=1163748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus ATCC 49840.;"
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|
scnpilot_solids2_trim150_scaffold_105_64
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
78264..79706
----------------- DNA (1443bp) protein (481aa) |
Aminopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS53_9GAMM
Aminopeptidase {ECO:0000313|EMBL:EIL90044.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative aminopeptidase
|
|
scnpilot_solids2_trim150_scaffold_105_65
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(79879..82992)
----------------- DNA (3114bp) protein (1038aa) |
Acriflavin resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVV4_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGG90394.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
cation/multidrug efflux pump
|
|
scnpilot_solids2_trim150_scaffold_105_66
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(82997..84115)
----------------- DNA (1119bp) protein (373aa) |
Secretion protein HlyD n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS55_9GAMM
Secretion protein HlyD {ECO:0000313|EMBL:EIL90046.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
|
|
scnpilot_solids2_trim150_scaffold_105_67
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
84406..84939
----------------- DNA (534bp) protein (178aa) |
RNase III inhibitor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS57_9GAMM
putative phosphatase, C-terminal domain of histone macro H2A1 like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_105_68
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(85004..86725)
----------------- DNA (1722bp) protein (574aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS58_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90049.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_105_69
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(86722..88560)
----------------- DNA (1839bp) protein (613aa) |
Membrane protein involved in colicin uptake n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNF9_9GAMM
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:EIM01001.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tetratricopeptide repeat protein
|
|
scnpilot_solids2_trim150_scaffold_105_70
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(88557..89543)
----------------- DNA (987bp) protein (329aa) |
Mg-chelatase subunit ChlD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNG0_9GAMM
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EIM01002.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Mg-chelatase subunit ChlD
|
|
scnpilot_solids2_trim150_scaffold_105_71
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(89536..90066)
----------------- DNA (531bp) protein (177aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NS83_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90401.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_105_72
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(90063..90980)
----------------- DNA (918bp) protein (306aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJY6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90402.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_105_73
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(91001..91996)
----------------- DNA (996bp) protein (332aa) |
MoxR-like ATPase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL56_9GAMM
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:AGG90403.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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|
scnpilot_solids2_trim150_scaffold_105_74
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(92203..94497)
----------------- DNA (2295bp) protein (765aa) |
Type IV pilus secretin PilQ/competence protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS64_9GAMM
Type IV pilus secretin PilQ/competence protein {ECO:0000313|EMBL:EIL90055.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type IV pilus secretin PilQ/competence protein
|
|
scnpilot_solids2_trim150_scaffold_105_75
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(94519..95064)
----------------- DNA (546bp) protein (182aa) |
Tfp pilus assembly protein PilP n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH9_9GAMM
Tfp pilus assembly protein PilP
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_105_76
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(95061..95717)
----------------- DNA (657bp) protein (219aa) |
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS66_9GAMM
Fimbrial assembly membrane protein {ECO:0000313|EMBL:EIL90057.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Tfp pilus assembly protein PilO
|
|
scnpilot_solids2_trim150_scaffold_105_77
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(95714..96403)
----------------- DNA (690bp) protein (230aa) |
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW7_9GAMM
Tfp pilus assembly protein PilN
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:AGG90407.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_105_78
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(96403..97461)
----------------- DNA (1059bp) protein (353aa) |
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW8_9GAMM
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGG90408.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_105_79
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
97686..100205
----------------- DNA (2520bp) protein (840aa) |
Penicillin-binding protein, 1A family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHN1_9GAMM
penicillin-binding protein, 1A family
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:AGG90409.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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|
scnpilot_solids2_trim150_scaffold_105_80
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(100354..101649)
----------------- DNA (1296bp) protein (432aa) |
citrate synthase I, hexameric type (EC:2.3.3.1)
Citrate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX1_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_105_81
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(101861..102130)
----------------- DNA (270bp) protein (90aa) |
50S ribosomal protein L31 type B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2A7_9GAMM
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal protein L31
|
|
scnpilot_solids2_trim150_scaffold_105_82
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(102248..104347)
----------------- DNA (2100bp) protein (700aa) |
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2A9_9GAMM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EIL93600.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
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scnpilot_solids2_trim150_scaffold_105_83
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(104439..104822)
----------------- DNA (384bp) protein (128aa) |
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX5_9GAMM
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AGG90415.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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|
scnpilot_solids2_trim150_scaffold_105_84
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(104997..107162)
----------------- DNA (2166bp) protein (722aa) |
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNH6_9GAMM
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIM01018.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(p)ppGpp synthetase, RelA/SpoT family
|
|
scnpilot_solids2_trim150_scaffold_105_85
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(107344..107634)
----------------- DNA (291bp) protein (97aa) |
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
DNA-directed RNA polymerase subunit omega n=3 Tax=Rhodanobacter RepID=I4WVX7_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_105_86
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
107821..108666
----------------- DNA (846bp) protein (282aa) |
Surface lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2B3_9GAMM
Surface lipoprotein {ECO:0000313|EMBL:EIL93604.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
surface lipoprotein
|
|
scnpilot_solids2_trim150_scaffold_105_87 |
Not on your lists |
108977..110092
----------------- DNA (1116bp) protein (372aa) |
Secretion protein HlyD n=1 Tax=mine drainage metagenome RepID=T1BJT8_9ZZZZ
Secretion protein HlyD {ECO:0000313|EMBL:EQD53519.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
mdtA; multidrug efflux transporter; K07799 putative multidrug efflux transporter MdtA
|
|
scnpilot_solids2_trim150_scaffold_105_88 |
Not on your lists |
110089..113244
----------------- DNA (3156bp) protein (1052aa) |
Multidrug resistance protein MdtC n=4 Tax=mine drainage metagenome RepID=T1BHB2_9ZZZZ
rbh
Multidrug resistance protein MdtC {ECO:0000313|EMBL:EQD53520.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
|
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scnpilot_solids2_trim150_scaffold_105_89
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(113380..114780)
----------------- DNA (1401bp) protein (467aa) |
Putative amino acid decarboxylase, Pyridoxal-dependent protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG77_9ACTN
rbh
Amino acid decarboxylase {ECO:0000313|EMBL:KGQ20508.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
pyridoxal-dependent decarboxylase
rbh
|
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scnpilot_solids2_trim150_scaffold_105_90 |
Not on your lists |
114963..116513
----------------- DNA (1551bp) protein (517aa) |
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003722D89
rbh
Peptidase family M28 {ECO:0000313|EMBL:AGU10830.1}; Flags: Fragment;; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
peptidase M28
rbh
|