name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_105_91
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(116533..117429)
----------------- DNA (897bp) protein (299aa) |
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K8_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94049.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
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scnpilot_solids2_trim150_scaffold_105_92
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
117548..118147
----------------- DNA (600bp) protein (200aa) |
2-dehydropantoate 2-reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3K7_9GAMM
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:EIL94048.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative dinucleotide-binding enzyme
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|
scnpilot_solids2_trim150_scaffold_105_trna_3
unknown
|
Not on your lists |
comp(118294..118364)
----------------- DNA (71bp) |
transferRNA Cys
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scnpilot_solids2_trim150_scaffold_105_trna_2
unknown
|
Not on your lists |
comp(118446..118518)
----------------- DNA (73bp) |
transferRNA Gly
|
|
scnpilot_solids2_trim150_scaffold_105_93
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(118596..119213)
----------------- DNA (618bp) protein (206aa) |
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AGG88757.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AGG88757.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXZ8_9GAMM
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scnpilot_solids2_trim150_scaffold_105_94
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(119283..121109)
----------------- DNA (1827bp) protein (609aa) |
UvrABC system protein C n=1 Tax=Rhodanobacter denitrificans RepID=M4NLZ1_9GAMM
Excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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scnpilot_solids2_trim150_scaffold_105_95
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(121162..121935)
----------------- DNA (774bp) protein (258aa) |
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWP4_9GAMM
3-deoxy-D-manno-octulosonate cytidylyltransferase
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scnpilot_solids2_trim150_scaffold_105_96
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(121996..123210)
----------------- DNA (1215bp) protein (405aa) |
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY01_9GAMM
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scnpilot_solids2_trim150_scaffold_105_97
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(123341..124429)
----------------- DNA (1089bp) protein (363aa) |
chorismate mutase, clade 2 (EC:5.4.99.5 4.2.1.51)
Chorismate mutase, clade 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNL7_9GAMM
Chorismate mutase, clade 2 {ECO:0000313|EMBL:EIL88808.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
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scnpilot_solids2_trim150_scaffold_105_98
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(124596..125363)
----------------- DNA (768bp) protein (256aa) |
FHA domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIP3_9GAMM
FHA domain-containing protein {ECO:0000313|EMBL:EIL99334.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
FHA domain-containing protein
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scnpilot_solids2_trim150_scaffold_105_99
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
125538..125813
----------------- DNA (276bp) protein (92aa) |
Putative polyhydroxyalkanoic acid system protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY05_9GAMM
putative polyhydroxyalkanoic acid system protein
Putative polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:AGG88750.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
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scnpilot_solids2_trim150_scaffold_105_100
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
125855..126130
----------------- DNA (276bp) protein (92aa) |
Translation initiation factor IF-1 n=2 Tax=Rhodanobacter RepID=I4WY06_9GAMM
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
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scnpilot_solids2_trim150_scaffold_105_101
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(126200..128455)
----------------- DNA (2256bp) protein (752aa) |
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIP6_9GAMM
ATP-dependent Clp protease subunit {ECO:0000313|EMBL:EIL99337.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
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scnpilot_solids2_trim150_scaffold_105_102
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(128520..128846)
----------------- DNA (327bp) protein (109aa) |
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWQ2_9GAMM
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
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scnpilot_solids2_trim150_scaffold_105_103
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
129014..130159
----------------- DNA (1146bp) protein (382aa) |
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNK9_9GAMM
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scnpilot_solids2_trim150_scaffold_105_104
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
130205..130825
----------------- DNA (621bp) protein (207aa) |
High frequency lysogenization protein HflD homolog n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIQ0_9GAMM
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized protein involved in purine metabolism
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scnpilot_solids2_trim150_scaffold_105_105
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
130864..131529
----------------- DNA (666bp) protein (222aa) |
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051955};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNAse T (EC:3.1.13.-)
Ribonuclease T n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIQ2_9GAMM
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scnpilot_solids2_trim150_scaffold_105_106
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(131545..131838)
----------------- DNA (294bp) protein (98aa) |
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPE1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89082.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
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scnpilot_solids2_trim150_scaffold_105_107
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(131835..132578)
----------------- DNA (744bp) protein (248aa) |
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
23S rRNA Gm-2251 2'-O-methyltransferase (EC:2.1.1.-)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR0_9GAMM
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scnpilot_solids2_trim150_scaffold_105_108
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(132575..135151)
----------------- DNA (2577bp) protein (859aa) |
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM
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scnpilot_solids2_trim150_scaffold_105_trna_1
unknown
|
Not on your lists |
135293..135376
----------------- DNA (84bp) |
transferRNA Leu
|