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scnpilot_solids2_trim150_scaffold_82

Search features with annotation key words

Displaying items 31-60 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_82_30
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30454..31398
-----------------
DNA (945bp)
protein (315aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C9BAB
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT61489.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_82_31
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31395..32204
-----------------
DNA (810bp)
protein (270aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000318BD35
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92227.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
putative ABC transporter permease
scnpilot_solids2_trim150_scaffold_82_32
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

32251..33642
-----------------
DNA (1392bp)
protein (464aa)
two-component system, sensor kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031C6F46 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_82_33
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33639..34301
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003484106 rbh
Oxygen regulatory protein NreC {ECO:0000313|EMBL:KJL28710.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
two component transcriptional regulator, LuxR family
scnpilot_solids2_trim150_scaffold_82_34
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34362..34967
-----------------
DNA (606bp)
protein (202aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dcd; deoxycytidine deaminase; K01494 dCTP deaminase [EC:3.5.4.13] rbh
deoxycytidine triphosphate deaminase n=1 Tax=Microbacterium barkeri RepID=UPI0002D4140F rbh
scnpilot_solids2_trim150_scaffold_82_35
Caenorhabditis brenneri, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

34969..35679
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B48EB9
Putative uncharacterized protein {ECO:0000313|EMBL:EGT44756.1}; TaxID=135651 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis brenneri (Nematode worm).;"
scnpilot_solids2_trim150_scaffold_82_36
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35886..36650)
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KF21_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL34528.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_37
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36736..37251
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KD32_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM72766.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_82_38
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37252..38634)
-----------------
DNA (1383bp)
protein (461aa)
Major facilitator superfamily protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2X9P3_9MICO rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:GAD34166.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
major facilitator superfamily protein; K06902 MFS transporter, UMF1 family rbh
scnpilot_solids2_trim150_scaffold_82_39
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38875..39336
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344A28E
Uncharacterized protein {ECO:0000313|EMBL:KJL33847.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_40
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39338..40717)
-----------------
DNA (1380bp)
protein (460aa)
uracil permease n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI000380709C
Uric acid transporter UacT {ECO:0000313|EMBL:CEA09456.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
ncs2; uracil-xanthine permease; K03458 nucleobase:cation symporter-2, NCS2 family
scnpilot_solids2_trim150_scaffold_82_41
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40915..42774
-----------------
DNA (1860bp)
protein (620aa)
Chaperone protein DnaK n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB52_9MICO rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dnaK; molecular chaperone; K04043 molecular chaperone DnaK rbh
scnpilot_solids2_trim150_scaffold_82_42
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42777..43397
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003039C76 rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
molecular chaperone GrpE; K03687 molecular chaperone GrpE
scnpilot_solids2_trim150_scaffold_82_43
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43405..44373
-----------------
DNA (969bp)
protein (323aa)
molecular chaperone DnaJ n=1 Tax=Microbacterium barkeri RepID=UPI00030A5BE2 rbh
Curved DNA-binding protein {ECO:0000313|EMBL:KJL22171.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dnaJ; DnaJ-class molecular chaperone; K03686 molecular chaperone DnaJ rbh
scnpilot_solids2_trim150_scaffold_82_44
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44375..44854
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KF51_9MICO
Putative heat shock protein HspR {ECO:0000313|EMBL:KJL33600.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR
scnpilot_solids2_trim150_scaffold_82_45
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44945..45379
-----------------
DNA (435bp)
protein (145aa)
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629F24
Uncharacterized protein {ECO:0000313|EMBL:KJC63654.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
scnpilot_solids2_trim150_scaffold_82_46
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45435..46790)
-----------------
DNA (1356bp)
protein (452aa)
Magnesium transporter n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQ73_9MICO rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Mg2+ transporter MgtE; K06213 magnesium transporter rbh
scnpilot_solids2_trim150_scaffold_82_47
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


47119..47589
-----------------
DNA (471bp)
protein (157aa)
50S ribosomal protein L21 n=1 Tax=Yaniella halotolerans RepID=UPI0003B303DF
Uncharacterized protein {ECO:0000313|EMBL:EWT02714.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein; K09958 hypothetical protein
scnpilot_solids2_trim150_scaffold_82_48
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47620..48204)
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00035DE8C5
Uncharacterized protein {ECO:0000313|EMBL:KJL22203.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_49
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48257..48664)
-----------------
DNA (408bp)
protein (136aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP33_LEIAQ
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:ERK70601.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
zinc-binding CMP/dCMP deaminase
scnpilot_solids2_trim150_scaffold_82_50
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48676..50127)
-----------------
DNA (1452bp)
protein (484aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
Aldehyde dehydrogenase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHS8_9ACTN rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EAR25284.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_solids2_trim150_scaffold_82_51
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50144..51754)
-----------------
DNA (1611bp)
protein (537aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037CB738 rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KHL01054.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_solids2_trim150_scaffold_82_52
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51751..52578)
-----------------
DNA (828bp)
protein (276aa)
enoyl-CoA hydratase/isomerase; K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-] rbh
crotonase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000362CBF4 rbh
Crotonase {ECO:0000313|EMBL:ERI37359.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
scnpilot_solids2_trim150_scaffold_82_53
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52575..53765)
-----------------
DNA (1191bp)
protein (397aa)
CAIB/BAIF family acyl-CoA thioesterase; K07749 formyl-CoA transferase [EC:2.8.3.16] rbh
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHS4_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR25280.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_solids2_trim150_scaffold_82_54
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53762..55123)
-----------------
DNA (1362bp)
protein (454aa)
Putative FAD dependent oxidoreductase domain protein n=1 Tax=Arthrobacter aurescens (strain TC1) RepID=A1R3Q6_ARTAT rbh
FAD dependent oxidoreductase domain-containing protein rbh
Putative FAD dependent oxidoreductase domain protein {ECO:0000313|EMBL:ABM09952.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;"
scnpilot_solids2_trim150_scaffold_82_55
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55132..56433)
-----------------
DNA (1302bp)
protein (434aa)
MFS transporter n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0W6E7_9NOCA rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAF44204.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
MFS transporter rbh
scnpilot_solids2_trim150_scaffold_82_56
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56631..57818)
-----------------
DNA (1188bp)
protein (396aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037B8D2A
CoA-transferase {ECO:0000313|EMBL:KIF78281.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
CoA-transferase, family 3 rbh
scnpilot_solids2_trim150_scaffold_82_57
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57821..58420)
-----------------
DNA (600bp)
protein (200aa)
XRE family transcriptional regulator n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00036C1ED3
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAF44203.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
transcriptional regulator, XRE family with cupinsensor
scnpilot_solids2_trim150_scaffold_82_58
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58591..59805
-----------------
DNA (1215bp)
protein (405aa)
Alpha-monoglucosyldiacylglycerol synthase {ECO:0000313|EMBL:KJL22204.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJL22204.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDA8_9MICO rbh
glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_82_59
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59810..60502)
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344F898 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT60405.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
Displaying items 31-60 of 252 in total

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