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scnpilot_solids2_trim150_scaffold_82

Search features with annotation key words

Displaying items 61-90 of 252 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_82_60
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60546..61751
-----------------
DNA (1206bp)
protein (402aa)
coaBC; phosphopantothenoylcysteine synthetase/decarboxylase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDB3_9MICO rbh
Coenzyme A biosynthesis bifunctional protein CoaBC {ECO:0000313|EMBL:KJQ55784.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids2_trim150_scaffold_82_61
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61824..64001
-----------------
DNA (2178bp)
protein (726aa)
protein disaggregation chaperone n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345B37C rbh
ATPase AAA {ECO:0000313|EMBL:EYT60403.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ATPase; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB rbh
scnpilot_solids2_trim150_scaffold_82_62
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63998..64918
-----------------
DNA (921bp)
protein (307aa)
LysR family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000364D98A
Transcriptional regulator {ECO:0000313|EMBL:KGO98455.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
scnpilot_solids2_trim150_scaffold_82_63
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65018..65623
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64034.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_82_64
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(65631..66971)
-----------------
DNA (1341bp)
protein (447aa)
phrB; deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344FF83 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_82_65
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67003..68001)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00037E37A7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK98962.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_66
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67995..69641)
-----------------
DNA (1647bp)
protein (549aa)
multidrug MFS transporter n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B407B6 rbh
Antiseptic resistance protein {ECO:0000313|EMBL:KJL28316.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease of the major facilitator superfamily rbh
scnpilot_solids2_trim150_scaffold_82_67
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69638..70456)
-----------------
DNA (819bp)
protein (273aa)
membrane protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6FD73 rbh
Membrane protein {ECO:0000313|EMBL:KGJ78369.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_82_68
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70686..72071)
-----------------
DNA (1386bp)
protein (462aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|RuleBase:RU000497}; EC=1.1.1.49 {ECO:0000256|RuleBase:RU000497};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] rbh
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EEFE8A rbh
scnpilot_solids2_trim150_scaffold_82_69
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72154..73944
-----------------
DNA (1791bp)
protein (597aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034849B8 rbh
Glucoamylase {ECO:0000313|EMBL:EYT60803.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
glycoside hydrolase 15-like protein rbh
scnpilot_solids2_trim150_scaffold_82_70
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73957..75027)
-----------------
DNA (1071bp)
protein (357aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030D3262 rbh
ABC-2 family transporter protein {ECO:0000313|EMBL:KJL30419.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sodium ABC transporter permease; K01992 ABC-2 type transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_82_71
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(75024..75947)
-----------------
DNA (924bp)
protein (308aa)
ABC transporter ATP-binding protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0Z1_9MICO rbh
ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_82_72
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76034..76729)
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQV8_9MICO rbh
Response regulator protein VraR {ECO:0000313|EMBL:KJL24096.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids2_trim150_scaffold_82_73
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76726..77985)
-----------------
DNA (1260bp)
protein (420aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L174_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM86039.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
signal transduction histidine kinase rbh
scnpilot_solids2_trim150_scaffold_82_74
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78180..79379
-----------------
DNA (1200bp)
protein (400aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037592B3 rbh
Inner membrane transport protein YajR {ECO:0000313|EMBL:KJQ55768.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
major facilitator superfamily protein rbh
scnpilot_solids2_trim150_scaffold_82_75
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79381..79563)
-----------------
DNA (183bp)
protein (61aa)
CsbD family protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BU58_XYLCX
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:ACZ31071.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
scnpilot_solids2_trim150_scaffold_82_76
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79699..80322
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379CC4A
Uncharacterized protein {ECO:0000313|EMBL:KJL34339.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
deaminase-reductase domain-containing protein
scnpilot_solids2_trim150_scaffold_82_77
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80319..81170)
-----------------
DNA (852bp)
protein (284aa)
Sugar phosphatase YidA {ECO:0000313|EMBL:KJL30406.1}; EC=3.1.3.23 {ECO:0000313|EMBL:KJL30406.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FF9B6A rbh
hypothetical protein; K07024
scnpilot_solids2_trim150_scaffold_82_78
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(81167..82030)
-----------------
DNA (864bp)
protein (288aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:KJL34333.1}; EC=3.1.11.2 {ECO:0000313|EMBL:KJL34333.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
xthA; exonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D681FB rbh
scnpilot_solids2_trim150_scaffold_82_79
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(82063..82596)
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA06801.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein SPAM21_11266 id=7719207 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein; K06910
scnpilot_solids2_trim150_scaffold_82_80
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82665..83225
-----------------
DNA (561bp)
protein (187aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] rbh
orotate phosphoribosyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI00030CA6E6 rbh
scnpilot_solids2_trim150_scaffold_82_81
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83241..84431)
-----------------
DNA (1191bp)
protein (397aa)
filamentation induced by cAMP protein Fic n=1 Tax=Agromyces subbeticus RepID=UPI0003B38867 rbh
Fic family protein {ECO:0000313|EMBL:KJC64288.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_82_82
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(84517..85146)
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C0EBF rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_82_83
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85346..86374
-----------------
DNA (1029bp)
protein (343aa)
LacI family transcription regulator n=1 Tax=Streptomyces sp. AA1529 RepID=UPI00030311BD
LacI family transcriptional regulator {ECO:0000313|EMBL:AJC59877.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_82_84
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86512..87807
-----------------
DNA (1296bp)
protein (432aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B78536 rbh
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EAR24759.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_82_85
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87878..88768
-----------------
DNA (891bp)
protein (297aa)
sugar ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B5CA8D rbh
Binding-protein-dependent transport permease {ECO:0000313|EMBL:EAR24127.1}; Flags: Fragment;; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
binding-protein-dependent transport system inner membrane protein rbh
scnpilot_solids2_trim150_scaffold_82_86
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88765..89682
-----------------
DNA (918bp)
protein (306aa)
ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002882D97 rbh
Binding-protein-dependent transport permease {ECO:0000313|EMBL:EAR24128.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
carbohydrate ABC transporter membrane protein; K02026 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_82_87
unknown

Not on your lists

comp(89762..89926)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_82_88
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90028..91494
-----------------
DNA (1467bp)
protein (489aa)
Putative oxidoreductase n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EG44_NOCAS rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAD85366.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_82_89
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91407..92123)
-----------------
DNA (717bp)
protein (239aa)
Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4J9_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEW56541.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
hypothetical protein; K07043
Displaying items 61-90 of 252 in total

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