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scnpilot_solids1_trim150_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_150_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1049)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000369BCB4
SSS sodium solute transporter superfamily protein; K03307 solute:Na+ symporter, SSS family
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACT96886.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_150_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1132..2223)
DNA (1092bp) protein (364aa)
Inositol 2-dehydrogenase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18] rbh
Inositol 2-dehydrogenase {ECO:0000313|EMBL:ACT96887.1}; EC=1.1.1.18 {ECO:0000313|EMBL:ACT96887.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003694B80 rbh
scnpilot_solids1_trim150_scaffold_150_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2251..3717)
DNA (1467bp) protein (489aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] rbh
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI000367C917 rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACT96888.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_150_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3957..4973)
DNA (1017bp) protein (339aa)
PfkB domain-containing protein; K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] rbh
PfkB domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXY8_DYAFD rbh
PfkB domain protein {ECO:0000313|EMBL:ACT96889.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_150_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5006..5881)
DNA (876bp) protein (292aa)
myo-inositol catabolism IolB domain-containing protein; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-] rbh
myo-inositol catabolism protein LolB n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F7F19 rbh
Myo-inositol catabolism IolB domain protein {ECO:0000313|EMBL:ACT96890.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_150_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6012..7040
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACT96891.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACT96891.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
LacI family transcription regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00038060BF rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_150_7
unknown

Not on your lists

comp(7096..7530)
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_150_8
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7746..8162
DNA (417bp) protein (139aa)
CBS domain containing protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FL09_FLAJ1
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ABQ04101.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
scnpilot_solids1_trim150_scaffold_150_9
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8404..9501)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C8641 rbh
oxidoreductase domain-containing protein rbh
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids1_trim150_scaffold_150_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9979..11070)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6I0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96825.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_150_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11275..11694)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQN8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43285.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_150_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11714..12112)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQN7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96771.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_150_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12237..15224
DNA (2988bp) protein (996aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EBD26 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO43283.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_150_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15338..17731
DNA (2394bp) protein (798aa)
peptidoglycan glycosyltransferase; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] rbh
Peptidoglycan glycosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQN5_NIAKG rbh
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KIC91403.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_150_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17818..18486
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB44_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:GAO43239.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_150_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18608..18889)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95692.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_150_17
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19193..19753
DNA (561bp) protein (187aa)
Outer membrane protein-like protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBR8_SPHS2
hypothetical protein; K08995 putative membrane protein
Outer membrane protein-like protein {ECO:0000313|EMBL:ADZ78660.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_150_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19812..21233)
DNA (1422bp) protein (474aa)
Multi antimicrobial extrusion protein MatE n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEA1_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC94937.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
multi antimicrobial extrusion protein MatE rbh
scnpilot_solids1_trim150_scaffold_150_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21277..21936)
DNA (660bp) protein (220aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] rbh
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Transaldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T1_NIAKG rbh
scnpilot_solids1_trim150_scaffold_150_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22166..23581)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003751EC8
Uncharacterized protein {ECO:0000313|EMBL:KIC93595.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_150_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23625..24860
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372EEEE rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC93434.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K09808 lipoprotein-releasing system permease protein
scnpilot_solids1_trim150_scaffold_150_22
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24885..25562)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036C6583
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGO88499.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_150_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26114..26701
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS66_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16044.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_150_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26776..29607)
DNA (2832bp) protein (944aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-]
Peptidase M16 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP4_NIAKG
Peptidase M16 {ECO:0000313|EMBL:KIC93257.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_150_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29869..31299)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368CD2C rbh
Transporter {ECO:0000313|EMBL:KIC93720.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
tolC; outer membrane efflux protein; K12340 outer membrane channel protein rbh
scnpilot_solids1_trim150_scaffold_150_26
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31403..32065)
DNA (663bp) protein (221aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG08_9SPHI rbh
ABC transporter related protein {ECO:0000313|EMBL:EHQ26296.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
phosphonate-transporting ATPase rbh
scnpilot_solids1_trim150_scaffold_150_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32271..33434)
DNA (1164bp) protein (388aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS1_NIAKG rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEV98904.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_150_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33867..35024
DNA (1158bp) protein (386aa)
5-(carboxyamino)imidazole ribonucleotide synthase; K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastel
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS3_NIAKG rbh
scnpilot_solids1_trim150_scaffold_150_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35302..35826
DNA (525bp) protein (175aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter s
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS7_NIAKG
scnpilot_solids1_trim150_scaffold_150_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35875..36312)
DNA (438bp) protein (146aa)
Esterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNN1_NIAKG
esterase
Esterase {ECO:0000313|EMBL:AEW00957.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 61 in total

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