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scnpilot_solids1_trim150_scaffold_150_32

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(37268..37825)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NNB2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 179.0
  • Bit_score: 269
  • Evalue 3.60e-69
RNA polymerase {ECO:0000313|EMBL:AHF15320.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 171.0
  • Bit_score: 257
  • Evalue 1.50e-65
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 179.0
  • Bit_score: 253
  • Evalue 3.70e-65

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGTCTATGCAAAGCAACCATAACATGAGTGAAAACGACTTAATAAAAGGTTGTCTGGAGGGAGATCGCCGGGCGCAGGAGCAATTATATCAAAAGTTTTCACCCAAAATGTACGGTGTGTGCCTCCGCTATGCCGGCAAAGCTGAAGATGCCCAGGATATTTTGCAGGATGGATTTGTGAAAGTTTTCAAAAATCTCCACATGTACAGGGGCGATGGATCGTTTGAAGGCTGGATTCGAAGGATATTTGTAAATACGGCAATAGAACACTATCGAAGGCAGGTTAATCTTTACCCGGTTACCGAAAATCATGAGAACCTGCTTGAAACAAAAGAAATATCCGCTTTTGATAGTTTAAGTGTGAAGGACCTGATGAAGATCATCCAGCAGTTGTCTCCTGGGTACAGAACAGTGTTTAACTTATATGTAGTTGAAGGCTATTCGCACAAAGAGATAGCGGAAATGATTGGTATTAGCGAAGGAACGAGTAAATCGCAACTGGCAAGAGCAAAAGGAGTGTTGCAGAATCTCATTAGGGCAAAAAGAACATCACCATAA
PROTEIN sequence
Length: 186
MSMQSNHNMSENDLIKGCLEGDRRAQEQLYQKFSPKMYGVCLRYAGKAEDAQDILQDGFVKVFKNLHMYRGDGSFEGWIRRIFVNTAIEHYRRQVNLYPVTENHENLLETKEISAFDSLSVKDLMKIIQQLSPGYRTVFNLYVVEGYSHKEIAEMIGISEGTSKSQLARAKGVLQNLIRAKRTSP*